8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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Details about selected cell
NeuroMorpho.Org ID :  NMO_282372
Cell Name :  3DDS_1
Archive Name :  Kyrargyri_Attwell
Species Name :  mouse
Strain :  C57BL/6
Structural Domains :  Processes, Soma
Physical Integrity :  Processes Moderate
Morphological Attributes :  Diameter, 3D, Angles
Min Age :  90.0 days
Max Age :  90.0 days
Gender :  Male/Female
Min Weight :  Not reported
Max Weight :  Not reported
Development :  adult
Primary Brain Region :  hippocampus
Secondary Brain Region :  Not reported
Tertiary Brain Region :  Not reported
Primary Cell Class :  Glia
Secondary Cell Class :  microglia
Tertiary Cell Class :  Iba1-positive
Original Format :  Vaa3D.swc
Experiment Protocol :  in vitro
Experimental Condition :  P2Y13 knockout
Staining Method :  immunostaining
Slicing Direction :  horizontal
Slice Thickness :  75  μm
Tissue Shrinkage :  Not reported
Objective Type :  oil
Magnification :  63x
Reconstruction Method :  Vaa3D
Date of Deposition :  2020-08-18
Date of Upload :  2024-03-28
Persistence Vector :  3DDS_1.pvec
Note :  This reconstruction was obtained from CA1-CA2 regions, specifically from strata radiatum and lacunosum moleculare.

Reference Article
Related Article Reference :  P2Y13 receptors regulate microglial morphology, surveillance, and resting levels of interleukin 1β release.

Measurements
Soma Surface :  195.07 μm2
Number of Stems :  9
Number of Bifurcations :  26
Number of Branches :  61
Overall Width :  51.1 μm
Overall Height :  26.8 μm
Overall Depth :  36.96 μm
Average Diameter :  0.42 μm
Total Length :  484.15 μm
Total Surface :  1136.2 μm2
Total Volume :  309.03 μm3
Max Euclidean Distance :  34.62 μm
Max Path Distance :  66.74 μm
Max Branch Order :  6
Average Contraction :  0.86
Total Fragmentation :  732
Partition Asymmetry :  0.43
Average Rall's Ratio :  1.73
Average Bifurcation Angle Local :  42.51°
Average Bifurcation Angle Remote :  70.26°
Fractal Dimension :  1.07

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