Version 8.6.41 - Released: 2024-06-25 - Content: 264771 cells
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What is NeuroMorpho.Org?
NeuroMorpho.Org is a centrally curated inventory of digitally reconstructed neurons and glia. It contains contributions from hundreds of laboratories worldwide and is continuously updated as new morphological reconstructions are collected, published, and shared. The goal of NeuroMorpho.Org is to provide free access to all available neuronal reconstruction data in the neuroscience community.

Why is NeuroMorpho.Org relevant?
Morphological data are essential for understanding the cellular complexity of the nervous system and are used for analysis, visualization, and modeling. NeuroMorpho.Org was established to facilitate access to such data and to encourage data sharing within the neuroscience community. A centrally curated and annotated inventory provides the opportunity to access accurate and verified data that is presented in a unified format. Deposition and distribution of reconstruction files ultimately prevents data loss and minimizes effort required by data owners. It also provides a "one-stop" entry point for all available reconstructions, thus maximizing data visibility and impact.

What is included in NeuroMorpho.Org?
Each neuron in NeuroMorpho.Org is represented by a name, general information (metadata), the original and standardized ASCII files of the digital morphological reconstruction (see Details on Standardization Process), and a set of morphometric features (see Details on available measures). You can browse the website or search for specific cells (see QuickStart guide). For suggestions, questions not answered in the FAQs, or if you have or know of digital reconstructions of neuronal morphology that could be included in this inventory, please email us at nmadmin@gmu.edu or neuromorpho@gmail.com.

Number of reconstructions in the database at each version release.

Number of brain regions, cell types, species and archives in the database at each version release.

See Detailed Statistics for additional information about the database.

Total number of downloads (incl. auxiliary files) from and hits to the website.

How to contribute data to NeuroMorpho.Org?
The submission process is very straightforward:
1. Email the reconstruction files (zipped, if possible) to: neuromorpho@gmail.com
2. Fill in as much information possible in the Metadata Form and include it in your email.

When we receive your files, the reconstructions will be added to the processing pipeline and you will receive a confirmation email from NeuroMorpho.Org. We will take care of all technical aspects of processing, annotating and uploading your data to the website.

If you have additional questions about data submission, please email us at nmadmin@gmu.edu or neuromorpho@gmail.com.

   
Quick Factsv8.6
Reconstructions260078
Contributing Labs996
 
Species (94)#cells
mouse134898
rat55641
drosophila melanogaster36254
human10704
zebrafish6021
monkey3209
C. elegans1473
chimpanzee1052
Semipalmated sandpiper1038
Semipalmated plover820
Xenopus laevis748
capuchin monkey478
Clam worm416
Baboon401
Ruddy turnstone392
giraffe384
sheep336
collared plover332
cattle281
spotted sandpiper267
leopard254
cheetah233
Hamster227
rabbit215
domestic pig212
Lion189
bat178
elephant174
cricket163
zebra finch158
clouded leopard154
Masked Greenling154
cat151
ferret149
guinea pig149
humpback whale143
Steller's Sculpin123
goldfish117
Tiger105
turtle92
Bonobo83
African wild dog82
agouti80
Calango lizard80
pouched lamprey75
chicken71
manatee70
minke whale70
Zebra70
Rana esculenta62
Crab61
salamander60
Blue wildebeest58
blowfly56
Toadfish54
bottlenose dolphin53
locust42
Apis mellifera39
Domestic dog37
Greater kudu36
dragonfly 30
Caracal29
Wallaby27
Lemur24
Mongoose24
Aplysia23
proechimys17
Scinax granulatus15
Silkmoth15
Rhinella arenarum13
potto12
moth11
Axolotl10
Blind mole-rat10
Xenopus tropicalis10
red panda9
porpoise8
hippopotamus7
Treeshrew7
Ranitomeya imitator6
Sea lamprey6
Western tarsier6
opossum5
Orangutan5
sloth5
giant anteater4
Gorilla3
grasshopper3
Praying mantis (Hierodula membranacea)3
spiny lobster3
Crisia eburnea1
drosophila sechellia1
Mormyrid fish1
Praying mantis (Rhombodera megaera)1
 
Brain Regions (72)#cells
neocortex86413
hippocampus51515
basal ganglia14218
peripheral nervous system12250
main olfactory bulb11858
protocerebrum10018
optic Lobe8775
retina8542
cerebellum6411
brainstem5912
amygdala3859
spinal cord3771
endocrine system3138
entorhinal cortex3051
hypothalamus2674
Not reported2512
antennal lobe2457
ventrolateral neuropils2296
mesencephalon1759
adult central complex1723
Central nervous system1715
lateral horn1576
thalamus1480
somatic nervous system1453
myelencephalon1107
Left Mushroom Body1058
Right Mushroom Body1046
forebrain959
ventral thalamus738
cortex651
Cochlea511
subesophageal ganglion505
subesophageal zone-(SEZ)477
ventral striatum459
subiculum352
anterior olfactory nucleus326
adult subesophageal zone312
ganglion242
pallium222
pons209
basal forebrain200
olfactory cortex165
corpus callosum154
dorsal thalamus116
peptidergic circuit107
Periventricular region104
antenna96
olfactory pit93
eye circuit78
subpallium65
abdominal ganglion59
ventral nerve cord58
retinorecipient mesencephalon and diencephalon50
medulla38
stomatogastric ganglion36
Central complex33
pharyngeal nervous system20
accessory lobe11
Olfactory Bulb9
lateral line organ6
accessory olfactory bulb5
fornix4
lateral complex3
Pro-subiculum3
parasubiculum3
Right Adult Central Complex2
Left Adult Central Complex2
meninges2
Subventricular zone2
Pre-subiculum2
cerebral ganglion1
electrosensory lobe1
 
Quick Stats 8.6
Tracing downloaded 5592 person-centuries
Neuronal branches downloaded 4.7 billion
Neuropil length downloaded 130 km
References to data in NeuroMorpho.Org ≥2800
Visiting countries 210
 
Literature Coverage
Articles mined
Identified positive
Available
Unavailable
May be available
 
Most Downloaded 8.5
Cell type sensory cell
Species drosophila melanogaster
Brain region peripheral nervous system
Archive Cox,Ascoli
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