|
| Details about selected cell |
| NeuroMorpho.Org ID : | NMO_100004 |
| Cell Name : | test_set_skeleton_310 |
| Archive Name : | Kornfeld |
| Species Name : | zebra finch |
| Strain : | Not reported |
| Structural Domains : | Neurites, No Soma |
| Physical Integrity : | Neurites Moderate |
| Morphological Attributes : | No Diameter, 3D, Angles |
| Min Age : | 90.0 days
|
| Max Age : | 90.0 days
|
| Gender : |
Male
|
| Min Weight : | Not reported
|
| Max Weight : | Not reported
|
| Development : | adult |
| Primary Brain Region : | basal ganglia |
| Secondary Brain Region : | Area X |
| Tertiary Brain Region : | Not reported |
| Primary Cell Class : | principal cell |
| Secondary Cell Class : | Not reported |
| Tertiary Cell Class : | Not reported |
| Original Format : | Knossos.nml |
| Experiment Protocol : | in vitro |
| Experimental Condition : | Control |
| Staining Method : | Osmium tetraoxide |
| Slicing Direction : | parasagittal |
| Slice Thickness : | 0.029
μm |
| Tissue Shrinkage : |
Not reported
|
| Objective Type : | electron microscopy |
| Magnification : | Not reported
|
| Reconstruction Method : | Knossos |
| Date of Deposition : | 2018-09-02 |
| Date of Upload : | 2018-11-27 |
| Persistence Vector : | test_set_skeleton_310.pvec |
|
|
| Reference Article |
| Related Article Reference : | High-precision automated reconstruction of neurons with flood-filling networks. |
|
|
|
|
| Measurements |
| Soma Surface : |
N/A |
| Number of Stems : |
2 |
| Number of Bifurcations : |
158 |
| Number of Branches : |
318 |
| Overall Width : |
51.34 μm |
| Overall Height : |
112.66 μm |
| Overall Depth : |
63.31 μm |
| Average Diameter : |
0.25 μm |
| Total Length : |
664.72 μm |
| Total Surface : |
522.07 μm2 |
| Total Volume : |
32.63 μm3 |
| Max Euclidean Distance : |
106.19 μm |
| Max Path Distance : |
139.57 μm |
| Max Branch Order : |
50 |
| Average Contraction : |
0.9 |
| Total Fragmentation : |
4126 |
| Partition Asymmetry : |
0.76 |
| Average Rall's Ratio : |
2 |
| Average Bifurcation Angle Local : |
90.02° |
| Average Bifurcation Angle Remote : |
95.07° |
| Fractal Dimension : |
1.06 |
|
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