8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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Details about selected cell
NeuroMorpho.Org ID :  NMO_107059
Cell Name :  shX1_X5rescue_Map2_20x_1x_7z
Archive Name :  Darnell
Species Name :  mouse
Strain :  CD1
Structural Domains :  Dendrites, No Soma, No Axon
Physical Integrity :  Dendrites Moderate
Morphological Attributes :  No Diameter, 2D, Angles
Min Age :  18.0 days
Max Age :  18.0 days
Gender :  Not reported
Min Weight :  Not reported
Max Weight :  Not reported
Development :  embryonic
Primary Brain Region :  hippocampus
Secondary Brain Region :  Not reported
Tertiary Brain Region :  Not reported
Primary Cell Class :  principal cell
Secondary Cell Class :  Not reported
Tertiary Cell Class :  Not reported
Original Format :  Simple Neurite Tracer.traces
Experiment Protocol :  culture
Experimental Condition :  shX1 + X5
Staining Method :  green fluorescent protein, immunostaining
Slicing Direction :  Not applicable
Slice Thickness :  Not applicable
Tissue Shrinkage :  Not reported
Objective Type :  Not reported
Magnification :  20x
Reconstruction Method :  Simple Neurite Tracer
Date of Deposition :  2018-10-05
Date of Upload :  2019-04-08
Persistence Vector :  shX1_X5rescue_Map2_20x_1x_7z.pvec
Note :  Transfected at DIV 10 and fixed at DIV 12

Reference Article
Related Article Reference :  Cell type-specific CLIP reveals that NOVA regulates cytoskeleton interactions in motoneurons.

Measurements
Soma Surface :  N/A
Number of Stems :  2
Number of Bifurcations :  20
Number of Branches :  42
Overall Width :  165.46 μm
Overall Height :  241.11 μm
Overall Depth :  0 μm
Average Diameter :  0.25 μm
Total Length :  1228.69 μm
Total Surface :  965.01 μm2
Total Volume :  60.31 μm3
Max Euclidean Distance :  164.14 μm
Max Path Distance :  270.77 μm
Max Branch Order :  9
Average Contraction :  0.91
Total Fragmentation :  2509
Partition Asymmetry :  0.55
Average Rall's Ratio :  2
Average Bifurcation Angle Local :  53.59°
Average Bifurcation Angle Remote :  59.73°
Fractal Dimension :  1.04

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