8.6.82 - Released: 2025-05-21 - Content: 275062 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_268477
Cell Name :  plx_culture-2_cell-2_2020_07_01
Archive Name :  Vlachos
Species Name :  mouse
Strain :  C57BL/6
Structural Domains :  Dendrites, Soma, No Axon
Physical Integrity :  Dendrites Moderate
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  3.0 days
Max Age :  5.0 days
Gender :  Male/Female
Min Weight :  Not reported
Max Weight :  Not reported
Development :  neonatal
Primary Brain Region :  hippocampus
Secondary Brain Region :  CA1
Tertiary Brain Region :  Not reported
Primary Cell Class :  principal cell
Secondary Cell Class :  pyramidal
Tertiary Cell Class :  Not reported
Original Format :  Neurolucida.swc
Experiment Protocol :  culture
Experimental Condition :  Microglia depletion (PLX3397 gavage)
Staining Method :  Streptavidin-Alexa Fluor 488
Slicing Direction :  horizontal
Slice Thickness :  300  μm
Tissue Shrinkage :  Not reported
Objective Type :  water
Magnification :  40x
Reconstruction Method :  Neurolucida
Date of Deposition :  2023-06-02
Date of Upload :  2023-07-05
Persistence Vector :  plx_culture-2_cell-2_2020_07_01.pvec
Note :  Tissue cultures were treated immediately after preparation (DIV 0) with the colony-stimulating factor 1 receptor (CSF-1R) inhibitor PLX3397 (50 nM) for at least 18 d.

Reference Article
Related Article Reference :  Microglial Cytokines Mediate Plasticity Induced by 10 Hz Repetitive Magnetic Stimulation.

Measurements
Soma Surface :  439.59 μm2
Number of Stems :  3
Number of Bifurcations :  40
Number of Branches :  83
Overall Width :  159.43 μm
Overall Height :  536.89 μm
Overall Depth :  28.92 μm
Average Diameter :  1.5 μm
Total Length :  4459.43 μm
Total Surface :  21014.6 μm2
Total Volume :  7880.46 μm3
Max Euclidean Distance :  407.8 μm
Max Path Distance :  442.36 μm
Max Branch Order :  14
Average Contraction :  0.94
Total Fragmentation :  1618
Partition Asymmetry :  0.57
Average Rall's Ratio :  2
Average Bifurcation Angle Local :  50.73°
Average Bifurcation Angle Remote :  39.02°
Fractal Dimension :  1.02

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