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| Details about selected cell |
| NeuroMorpho.Org ID : | NMO_48789 |
| Cell Name : | pcs5_7 |
| Archive Name : | Hamad |
| Species Name : | rat |
| Strain : | Long-Evans |
| Structural Domains : | Dendrites, Soma, No Axon |
| Physical Integrity : | Dendrites Complete |
| Morphological Attributes : | No Diameter, 3D, Angles |
| Min Age : | 0.0 day
|
| Max Age : | 1.0 day
|
| Gender : |
Male/Female
|
| Min Weight : | Not reported
|
| Max Weight : | Not reported
|
| Development : | neonatal |
| Primary Brain Region : | neocortex |
| Secondary Brain Region : | occipital |
| Tertiary Brain Region : | primary visual, superficial |
| Primary Cell Class : | principal cell |
| Secondary Cell Class : | pyramidal |
| Tertiary Cell Class : | Not reported |
| Original Format : | Neurolucida.asc |
| Experiment Protocol : | culture |
| Experimental Condition : | TARP Gamma-2 |
| Staining Method : | enhanced green fluorescent protein |
| Slicing Direction : | coronal |
| Slice Thickness : | 350
μm |
| Tissue Shrinkage : |
Reported 50% in z
Not corrected
|
| Objective Type : | oil |
| Magnification : | 100x |
| Reconstruction Method : | Neurolucida |
| Date of Deposition : | 2015-10-20 |
| Date of Upload : | 2016-09-01 |
| Persistence Vector : | pcs5_7.pvec |
| Note : | organotypic culture transfeted at 10 DIV and fixed at 15 DIV |
|
|
| Reference Article |
| Related Article Reference : | Type I TARPs promote dendritic growth of early postnatal neocortical pyramidal cells in organotypic cultures. |
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|
| Measurements |
| Soma Surface : |
7745.8 μm2 |
| Number of Stems : |
7 |
| Number of Bifurcations : |
33 |
| Number of Branches : |
73 |
| Overall Width : |
153.52 μm |
| Overall Height : |
265.5 μm |
| Overall Depth : |
9.43 μm |
| Average Diameter : |
2.36 μm |
| Total Length : |
2787.52 μm |
| Total Surface : |
20667.1 μm2 |
| Total Volume : |
12193.6 μm3 |
| Max Euclidean Distance : |
229.1 μm |
| Max Path Distance : |
301.49 μm |
| Max Branch Order : |
13 |
| Average Contraction : |
0.91 |
| Total Fragmentation : |
1754 |
| Partition Asymmetry : |
0.58 |
| Average Rall's Ratio : |
2 |
| Average Bifurcation Angle Local : |
64.03° |
| Average Bifurcation Angle Remote : |
65.9° |
| Fractal Dimension : |
1.03 |
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