8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_64375
Cell Name :  orphan_3559
Archive Name :  Denk
Species Name :  mouse
Strain :  C57BL/6
Structural Domains :  Processes, No Soma
Physical Integrity :  Processes Moderate
Morphological Attributes :  Diameter, 3D, Angles
Min Age :  30.0 days
Max Age :  30.0 days
Gender :  Not reported
Min Weight :  Not reported
Max Weight :  Not reported
Development :  young adult
Primary Brain Region :  retina
Secondary Brain Region :  Not reported
Tertiary Brain Region :  Not reported
Primary Cell Class :  Glia
Secondary Cell Class :  Not reported
Tertiary Cell Class :  Not reported
Original Format :  Knossos.swc
Experiment Protocol :  in vitro
Experimental Condition :  Control
Staining Method :  osmium and lead citrate
Slicing Direction :  Not reported
Slice Thickness :  0.025  μm
Tissue Shrinkage :  Reported 14%
Corrected (no values given)
Objective Type :  electron microscopy
Magnification :  Not reported
Reconstruction Method :  Knossos
Date of Deposition :  2015-01-10
Date of Upload :  2017-07-19
Persistence Vector :  orphan_3559.pvec
Note :  Converted to SWC by jefferislab.org/si/nblast

Reference Article
Related Article Reference :  Connectomic reconstruction of the inner plexiform layer in the mouse retina.

Measurements
Soma Surface :  N/A
Number of Stems :  2
Number of Bifurcations :  100
Number of Branches :  202
Overall Width :  10.11 μm
Overall Height :  13.18 μm
Overall Depth :  60.3 μm
Average Diameter :  1.71 μm
Total Length :  306.58 μm
Total Surface :  1648.43 μm2
Total Volume :  720.02 μm3
Max Euclidean Distance :  59.06 μm
Max Path Distance :  82.76 μm
Max Branch Order :  22
Average Contraction :  0.88
Total Fragmentation :  715
Partition Asymmetry :  0.66
Average Rall's Ratio :  1.99
Average Bifurcation Angle Local :  108.37°
Average Bifurcation Angle Remote :  94.49°
Fractal Dimension :  1.15

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