8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_79051
Cell Name :  neuron_2
Archive Name :  Peng
Species Name :  mouse
Strain :  Not reported
Structural Domains :  Neurites, No Soma
Physical Integrity :  Neurites Moderate
Morphological Attributes :  Diameter, 3D, Angles
Min Age :  Not reported
Max Age :  Not reported
Gender :  Not reported
Min Weight :  Not reported
Max Weight :  Not reported
Development :  not reported
Primary Brain Region :  neocortex
Secondary Brain Region :  occipital
Tertiary Brain Region :  primary visual
Primary Cell Class :  principal cell
Secondary Cell Class :  pyramidal
Tertiary Cell Class :  Not reported
Original Format :  Vaa3D.swc
Experiment Protocol :  Not reported
Experimental Condition :  Control
Staining Method :  Not reported
Slicing Direction :  Not reported
Slice Thickness :  Not reported
Tissue Shrinkage :  Not reported
Objective Type :  Not reported
Magnification :  Not reported
Reconstruction Method :  Vaa3D
Date of Deposition :  2017-05-17
Date of Upload :  2017-11-28
Persistence Vector :  neuron_2.pvec

Reference Article
Related Article Reference :  Fast assembling of neuron fragments in serial 3D sections.

Measurements
Soma Surface :  N/A
Number of Stems :  2
Number of Bifurcations :  188
Number of Branches :  378
Overall Width :  289.46 μm
Overall Height :  431.85 μm
Overall Depth :  437.65 μm
Average Diameter :  0.41 μm
Total Length :  16445.4 μm
Total Surface :  29044.2 μm2
Total Volume :  11574 μm3
Max Euclidean Distance :  437.47 μm
Max Path Distance :  1095.87 μm
Max Branch Order :  28
Average Contraction :  0.84
Total Fragmentation :  29328
Partition Asymmetry :  0.63
Average Rall's Ratio :  1.98
Average Bifurcation Angle Local :  61.33°
Average Bifurcation Angle Remote :  78.53°
Fractal Dimension :  1.08

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