8.6.82 - Released: 2025-05-21 - Content: 275062 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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Details about selected cell
NeuroMorpho.Org ID :  NMO_79050
Cell Name :  neuron_1
Archive Name :  Peng
Species Name :  mouse
Strain :  Not reported
Structural Domains :  Neurites, No Soma
Physical Integrity :  Neurites Moderate
Morphological Attributes :  Diameter, 3D, Angles
Min Age :  Not reported
Max Age :  Not reported
Gender :  Not reported
Min Weight :  Not reported
Max Weight :  Not reported
Development :  not reported
Primary Brain Region :  neocortex
Secondary Brain Region :  occipital
Tertiary Brain Region :  primary visual
Primary Cell Class :  principal cell
Secondary Cell Class :  pyramidal
Tertiary Cell Class :  Not reported
Original Format :  Vaa3D.swc
Experiment Protocol :  Not reported
Experimental Condition :  Control
Staining Method :  Not reported
Slicing Direction :  Not reported
Slice Thickness :  Not reported
Tissue Shrinkage :  Not reported
Objective Type :  Not reported
Magnification :  Not reported
Reconstruction Method :  Vaa3D
Date of Deposition :  2017-05-17
Date of Upload :  2017-11-28
Persistence Vector :  neuron_1.pvec

Reference Article
Related Article Reference :  Fast assembling of neuron fragments in serial 3D sections.

Measurements
Soma Surface :  N/A
Number of Stems :  2
Number of Bifurcations :  166
Number of Branches :  334
Overall Width :  340.46 μm
Overall Height :  498.73 μm
Overall Depth :  706.77 μm
Average Diameter :  0.33 μm
Total Length :  17879.1 μm
Total Surface :  23402 μm2
Total Volume :  10224.5 μm3
Max Euclidean Distance :  572.81 μm
Max Path Distance :  1292.62 μm
Max Branch Order :  17
Average Contraction :  0.8
Total Fragmentation :  44954
Partition Asymmetry :  0.54
Average Rall's Ratio :  1.97
Average Bifurcation Angle Local :  80.83°
Average Bifurcation Angle Remote :  91.35°
Fractal Dimension :  1.1

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