8.6.82 - Released: 2025-05-21 - Content: 275062 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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Details about selected cell
NeuroMorpho.Org ID :  NMO_182105
Cell Name :  neuron-6_9
Archive Name :  Shcheglovitov
Species Name :  human
Strain :  Not applicable
Structural Domains :  Dendrites, Soma, No Axon
Physical Integrity :  Dendrites Moderate
Morphological Attributes :  No Diameter, 2D, Angles
Min Age :  Not reported
Max Age :  Not reported
Gender :  Not reported
Min Weight :  Not reported
Max Weight :  Not reported
Development :  not reported
Primary Brain Region :  neocortex
Secondary Brain Region :  Not reported
Tertiary Brain Region :  Not reported
Primary Cell Class :  principal cell
Secondary Cell Class :  embryonic stem cell (ESC)-derived
Tertiary Cell Class :  Not reported
Original Format :  Neurolucida.dat
Experiment Protocol :  in vivo
Experimental Condition :  hemizygous SHANK3 deletion
Staining Method :  biocytin
Slicing Direction :  coronal
Slice Thickness :  300  μm
Tissue Shrinkage :  Not reported
Objective Type :  oil
Magnification :  20x
Reconstruction Method :  Neurolucida
Date of Deposition :  2022-03-14
Date of Upload :  2022-04-14
Persistence Vector :  neuron-6_9.pvec
Note :  Human ESC-derived neurons with cortical identity were transplanted in mouse PFC. This reconstruction was obtained at 13-17 months post-transplantation into the mouse PFC with SHANK3 +/-.

Reference Article
Related Article Reference :  Defective AMPA-mediated synaptic transmission and morphology in human neurons with hemizygous SHANK3 deletion engrafted in mouse prefrontal cortex.

Measurements
Soma Surface :  620.62 μm2
Number of Stems :  3
Number of Bifurcations :  11
Number of Branches :  25
Overall Width :  95.27 μm
Overall Height :  178.13 μm
Overall Depth :  0 μm
Average Diameter :  1.25 μm
Total Length :  567.04 μm
Total Surface :  2255.51 μm2
Total Volume :  959.77 μm3
Max Euclidean Distance :  136.92 μm
Max Path Distance :  154.11 μm
Max Branch Order :  7
Average Contraction :  0.9
Total Fragmentation :  671
Partition Asymmetry :  0.55
Average Rall's Ratio :  1.63
Average Bifurcation Angle Local :  82.77°
Average Bifurcation Angle Remote :  91.39°
Fractal Dimension :  1.03

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