8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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Details about selected cell
NeuroMorpho.Org ID :  NMO_87368
Cell Name :  myelinated_unk3265_30651
Archive Name :  Hildebrand
Species Name :  zebrafish
Strain :  Tg(elavl3:GCaMP5G)a4598 transgenic
Structural Domains :  Neurites, No Soma
Physical Integrity :  Neurites Moderate
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  5.5 days
Max Age :  5.5 days
Gender :  Not reported
Min Weight :  Not reported
Max Weight :  Not reported
Development :  larval
Primary Brain Region :  brainstem
Secondary Brain Region :  hindbrain
Tertiary Brain Region :  reticular formation, right
Primary Cell Class :  principal cell
Secondary Cell Class :  myelinated
Tertiary Cell Class :  Not reported
Original Format :  Catmaid.swc
Experiment Protocol :  in vitro
Experimental Condition :  Control
Staining Method :  osmium tetroxide/uranyl acetate
Slicing Direction :  perpendicular to the long axis
Slice Thickness :  0.06  μm
Tissue Shrinkage :  Not reported
Objective Type :  electron microscopy
Magnification :  Not reported
Reconstruction Method :  Catmaid
Date of Deposition :  2017-09-15
Date of Upload :  2018-04-16
Persistence Vector :  myelinated_unk3265_30651.pvec

Reference Article
Related Article Reference :  Whole-brain serial-section electron microscopy in larval zebrafish.

Measurements
Soma Surface :  N/A
Number of Stems :  2
Number of Bifurcations :  1
Number of Branches :  4
Overall Width :  3.82 μm
Overall Height :  74.19 μm
Overall Depth :  18.49 μm
Average Diameter :  0.25 μm
Total Length :  131.92 μm
Total Surface :  103.61 μm2
Total Volume :  6.48 μm3
Max Euclidean Distance :  53.13 μm
Max Path Distance :  75.18 μm
Max Branch Order :  2
Average Contraction :  0.7
Total Fragmentation :  836
Partition Asymmetry :  0.5
Average Rall's Ratio :  2
Average Bifurcation Angle Local :  100.9°
Average Bifurcation Angle Remote :  109.45°
Fractal Dimension :  1.14

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