8.6.82 - Released: 2025-05-21 - Content: 275062 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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Details about selected cell
NeuroMorpho.Org ID :  NMO_87339
Cell Name :  myelinated_unk1227_8972
Archive Name :  Hildebrand
Species Name :  zebrafish
Strain :  Tg(elavl3:GCaMP5G)a4598 transgenic
Structural Domains :  Neurites, Soma
Physical Integrity :  Neurites Moderate
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  5.5 days
Max Age :  5.5 days
Gender :  Not reported
Min Weight :  Not reported
Max Weight :  Not reported
Development :  larval
Primary Brain Region :  brainstem
Secondary Brain Region :  hindbrain
Tertiary Brain Region :  reticular formation, right
Primary Cell Class :  principal cell
Secondary Cell Class :  myelinated
Tertiary Cell Class :  Not reported
Original Format :  Catmaid.swc
Experiment Protocol :  in vitro
Experimental Condition :  Control
Staining Method :  osmium tetroxide/uranyl acetate
Slicing Direction :  perpendicular to the long axis
Slice Thickness :  0.06  μm
Tissue Shrinkage :  Not reported
Objective Type :  electron microscopy
Magnification :  Not reported
Reconstruction Method :  Catmaid
Date of Deposition :  2017-09-15
Date of Upload :  2018-04-16
Persistence Vector :  myelinated_unk1227_8972.pvec

Reference Article
Related Article Reference :  Whole-brain serial-section electron microscopy in larval zebrafish.

Measurements
Soma Surface :  42.31 μm2
Number of Stems :  2
Number of Bifurcations :  3
Number of Branches :  8
Overall Width :  13.6 μm
Overall Height :  220.26 μm
Overall Depth :  42.09 μm
Average Diameter :  0.25 μm
Total Length :  513.09 μm
Total Surface :  402.98 μm2
Total Volume :  25.19 μm3
Max Euclidean Distance :  230.31 μm
Max Path Distance :  458.32 μm
Max Branch Order :  3
Average Contraction :  0.76
Total Fragmentation :  2903
Partition Asymmetry :  0.67
Average Rall's Ratio :  2
Average Bifurcation Angle Local :  135.83°
Average Bifurcation Angle Remote :  98.35°
Fractal Dimension :  1.21

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