8.6.103 - Released: 2025-12-08 - Content: 285900 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_134928
Cell Name :  mPFC_w2_L5_06
Archive Name :  Kroon
Species Name :  mouse
Strain :  C57BL/6J
Structural Domains :  Dendrites, Soma, No Axon
Physical Integrity :  Dendrites Complete
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  13.0 days
Max Age :  16.0 days
Gender :  Male
Min Weight :  Not reported
Max Weight :  Not reported
Development :  young
Primary Brain Region :  neocortex
Secondary Brain Region :  medial prefrontal
Tertiary Brain Region :  layer 5
Primary Cell Class :  principal cell
Secondary Cell Class :  pyramidal
Tertiary Cell Class :  Not reported
Original Format :  Neuromantic.swc
Experiment Protocol :  in vitro
Experimental Condition :  Control
Staining Method :  Biocytin, streptavidin-488
Slicing Direction :  coronal
Slice Thickness :  300  μm
Tissue Shrinkage :  Not reported
Objective Type :  dry
Magnification :  10x
Reconstruction Method :  Neuromantic
Date of Deposition :  2020-05-01
Date of Upload :  2020-06-29
Persistence Vector :  mPFC_w2_L5_06.pvec
Note :  Reconstructions were made using raw data, then scaled down to their correct size in microns. During this process, branch thickness does not scale; it is therefore not to be used.

Reference Article
Related Article Reference :  Early postnatal development of pyramidal neurons across layers of the mouse medial prefrontal cortex.

Measurements
Soma Surface :  5484.1 μm2
Number of Stems :  9
Number of Bifurcations :  55
Number of Branches :  119
Overall Width :  329.35 μm
Overall Height :  486 μm
Overall Depth :  72 μm
Average Diameter :  2.66 μm
Total Length :  6582.66 μm
Total Surface :  56255.7 μm2
Total Volume :  45045 μm3
Max Euclidean Distance :  450.5 μm
Max Path Distance :  525.69 μm
Max Branch Order :  19
Average Contraction :  0.92
Total Fragmentation :  1757
Partition Asymmetry :  0.55
Average Rall's Ratio :  2.14
Average Bifurcation Angle Local :  68.86°
Average Bifurcation Angle Remote :  64.37°
Fractal Dimension :  1.02

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