8.6.96 - Released: 2025-11-05 - Content: 284158 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_134929
Cell Name :  mPFC_w2_L5_04
Archive Name :  Kroon
Species Name :  mouse
Strain :  C57BL/6J
Structural Domains :  Dendrites, Soma, Axon
Physical Integrity :  Dendrites Complete
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  13.0 days
Max Age :  16.0 days
Gender :  Male
Min Weight :  Not reported
Max Weight :  Not reported
Development :  young
Primary Brain Region :  neocortex
Secondary Brain Region :  medial prefrontal
Tertiary Brain Region :  layer 5
Primary Cell Class :  principal cell
Secondary Cell Class :  pyramidal
Tertiary Cell Class :  Not reported
Original Format :  Neuromantic.swc
Experiment Protocol :  in vitro
Experimental Condition :  Control
Staining Method :  Biocytin, streptavidin-488
Slicing Direction :  coronal
Slice Thickness :  300  μm
Tissue Shrinkage :  Not reported
Objective Type :  dry
Magnification :  10x
Reconstruction Method :  Neuromantic
Date of Deposition :  2020-05-01
Date of Upload :  2020-06-29
Persistence Vector :  mPFC_w2_L5_04.pvec
Note :  Reconstructions were made using raw data, then scaled down to their correct size in microns. During this process, branch thickness does not scale; it is therefore not to be used.

Reference Article
Related Article Reference :  Early postnatal development of pyramidal neurons across layers of the mouse medial prefrontal cortex.

Measurements
Soma Surface :  6174.9 μm2
Number of Stems :  11
Number of Bifurcations :  53
Number of Branches :  117
Overall Width :  328.59 μm
Overall Height :  749.28 μm
Overall Depth :  71 μm
Average Diameter :  2.74 μm
Total Length :  8844.06 μm
Total Surface :  76742.7 μm2
Total Volume :  63419.8 μm3
Max Euclidean Distance :  573.7 μm
Max Path Distance :  669.72 μm
Max Branch Order :  18
Average Contraction :  0.91
Total Fragmentation :  2254
Partition Asymmetry :  0.49
Average Rall's Ratio :  1.79
Average Bifurcation Angle Local :  68.19°
Average Bifurcation Angle Remote :  68.64°
Fractal Dimension :  1.02

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