8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_134911
Cell Name :  mPFC_w1_L5_06
Archive Name :  Kroon
Species Name :  mouse
Strain :  C57BL/6J
Structural Domains :  Dendrites, Soma, No Axon
Physical Integrity :  Dendrites Complete
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  6.0 days
Max Age :  8.0 days
Gender :  Male
Min Weight :  Not reported
Max Weight :  Not reported
Development :  young
Primary Brain Region :  neocortex
Secondary Brain Region :  medial prefrontal
Tertiary Brain Region :  layer 5
Primary Cell Class :  principal cell
Secondary Cell Class :  pyramidal
Tertiary Cell Class :  Not reported
Original Format :  Neuromantic.swc
Experiment Protocol :  in vitro
Experimental Condition :  Control
Staining Method :  Biocytin, streptavidin-488
Slicing Direction :  coronal
Slice Thickness :  300  μm
Tissue Shrinkage :  Not reported
Objective Type :  dry
Magnification :  10x
Reconstruction Method :  Neuromantic
Date of Deposition :  2020-05-01
Date of Upload :  2020-06-29
Persistence Vector :  mPFC_w1_L5_06.pvec
Note :  Reconstructions were made using raw data, then scaled down to their correct size in microns. During this process, branch thickness does not scale; it is therefore not to be used.

Reference Article
Related Article Reference :  Early postnatal development of pyramidal neurons across layers of the mouse medial prefrontal cortex.

Measurements
Soma Surface :  3178.92 μm2
Number of Stems :  9
Number of Bifurcations :  66
Number of Branches :  141
Overall Width :  255.61 μm
Overall Height :  486.94 μm
Overall Depth :  51.72 μm
Average Diameter :  2.8 μm
Total Length :  4103.87 μm
Total Surface :  36986.5 μm2
Total Volume :  32961.8 μm3
Max Euclidean Distance :  471.05 μm
Max Path Distance :  579.79 μm
Max Branch Order :  27
Average Contraction :  0.92
Total Fragmentation :  1578
Partition Asymmetry :  0.56
Average Rall's Ratio :  1.74
Average Bifurcation Angle Local :  75.37°
Average Bifurcation Angle Remote :  67.65°
Fractal Dimension :  1.03

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