8.6.103 - Released: 2025-12-08 - Content: 285900 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_134907
Cell Name :  mPFC_w1_L3_05
Archive Name :  Kroon
Species Name :  mouse
Strain :  C57BL/6J
Structural Domains :  Dendrites, Soma, No Axon
Physical Integrity :  Dendrites Complete
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  6.0 days
Max Age :  8.0 days
Gender :  Male
Min Weight :  Not reported
Max Weight :  Not reported
Development :  young
Primary Brain Region :  neocortex
Secondary Brain Region :  medial prefrontal
Tertiary Brain Region :  layer 3
Primary Cell Class :  principal cell
Secondary Cell Class :  pyramidal
Tertiary Cell Class :  Not reported
Original Format :  Neuromantic.swc
Experiment Protocol :  in vitro
Experimental Condition :  Control
Staining Method :  Biocytin, streptavidin-488
Slicing Direction :  coronal
Slice Thickness :  300  μm
Tissue Shrinkage :  Not reported
Objective Type :  dry
Magnification :  10x
Reconstruction Method :  Neuromantic
Date of Deposition :  2020-05-01
Date of Upload :  2020-06-29
Persistence Vector :  mPFC_w1_L3_05.pvec
Note :  Reconstructions were made using raw data, then scaled down to their correct size in microns. During this process, branch thickness does not scale; it is therefore not to be used.

Reference Article
Related Article Reference :  Early postnatal development of pyramidal neurons across layers of the mouse medial prefrontal cortex.

Measurements
Soma Surface :  2395.88 μm2
Number of Stems :  8
Number of Bifurcations :  39
Number of Branches :  86
Overall Width :  158.71 μm
Overall Height :  235.9 μm
Overall Depth :  51 μm
Average Diameter :  2.81 μm
Total Length :  2170.71 μm
Total Surface :  19631.4 μm2
Total Volume :  17695 μm3
Max Euclidean Distance :  187.1 μm
Max Path Distance :  231.81 μm
Max Branch Order :  10
Average Contraction :  0.93
Total Fragmentation :  824
Partition Asymmetry :  0.41
Average Rall's Ratio :  1.83
Average Bifurcation Angle Local :  67.96°
Average Bifurcation Angle Remote :  55.17°
Fractal Dimension :  1.02

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