8.6.82 - Released: 2025-05-21 - Content: 275062 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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Details about selected cell
NeuroMorpho.Org ID :  NMO_182315
Cell Name :  mCh_6
Archive Name :  Riera-Tur
Species Name :  mouse
Strain :  CD1
Structural Domains :  Neurites, Soma
Physical Integrity :  Neurites Complete
Morphological Attributes :  No Diameter, 2D, Angles
Min Age :  15.5 days
Max Age :  15.5 days
Gender :  Male/Female
Min Weight :  Not reported
Max Weight :  Not reported
Development :  embryonic
Primary Brain Region :  hippocampus
Secondary Brain Region :  Not reported
Tertiary Brain Region :  Not reported
Primary Cell Class :  principal cell
Secondary Cell Class :  pyramidal
Tertiary Cell Class :  Not reported
Original Format :  Simple Neurite Tracer.traces
Experiment Protocol :  culture
Experimental Condition :  Control
Staining Method :  mcherry, immunostaining
Slicing Direction :  Not applicable
Slice Thickness :  Not applicable
Tissue Shrinkage :  Not reported
Objective Type :  oil
Magnification :  40x
Reconstruction Method :  Simple Neurite Tracer
Date of Deposition :  2022-02-23
Date of Upload :  2022-04-21
Persistence Vector :  mCh_6.pvec
Note :  This reconstruction was obtained 12 after in vitro culture.

Reference Article
Related Article Reference :  Amyloid-like aggregating proteins cause lysosomal defects in neurons via gain-of-function toxicity.

Measurements
Soma Surface :  16.7 μm2
Number of Stems :  4
Number of Bifurcations :  70
Number of Branches :  144
Overall Width :  358.65 μm
Overall Height :  291.5 μm
Overall Depth :  0 μm
Average Diameter :  0.25 μm
Total Length :  3406.88 μm
Total Surface :  2675.75 μm2
Total Volume :  167.24 μm3
Max Euclidean Distance :  267.01 μm
Max Path Distance :  475.56 μm
Max Branch Order :  12
Average Contraction :  0.89
Total Fragmentation :  7841
Partition Asymmetry :  0.62
Average Rall's Ratio :  2
Average Bifurcation Angle Local :  87.64°
Average Bifurcation Angle Remote :  77.56°
Fractal Dimension :  1.06

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