8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_144981
Cell Name :  ko_-10_Neuron2_70_Dendrite-2nd-to-3rd
Archive Name :  Middei_Minichiello
Species Name :  mouse
Strain :  TrkbGad1-KO
Structural Domains :  Dendrites, No Soma, No Axon
Physical Integrity :  Dendrites Incomplete
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  2.0 months
Max Age :  2.0 months
Gender :  Male
Min Weight :  Not reported
Max Weight :  Not reported
Development :  adult
Primary Brain Region :  hippocampus
Secondary Brain Region :  dentate gyrus
Tertiary Brain Region :  Not reported
Primary Cell Class :  principal cell
Secondary Cell Class :  granule
Tertiary Cell Class :  mature
Original Format :  Neurolucida.dat
Experiment Protocol :  in vitro
Experimental Condition :  TrKB Knockout
Staining Method :  Golgi
Slicing Direction :  coronal
Slice Thickness :  100  μm
Tissue Shrinkage :  Not reported
Objective Type :  oil
Magnification :  100x
Reconstruction Method :  Neurolucida
Date of Deposition :  2020-10-24
Date of Upload :  2020-11-23
Persistence Vector :  ko_-10_Neuron2_70_Dendrite-2nd-to-3rd.pvec
Note :  Coronal sections corresponding to coordinates from -1,34 to -2,70 anteroposterior to bregma. Diameter was not measured in these cells. Values reported for this measure are arbitrary (N/A). Spines markers in the original files indicate branch order as follows: (.) for 1st order; (o) for 2nd order; (x) for 3rd order; (+) for 4th order

Reference Article
Related Article Reference :  Immature Dentate Granule Cells Require Ntrk2/Trkb for the Formation of Functional Hippocampal Circuitry.

Measurements
Soma Surface :  N/A
Number of Stems :  1
Number of Bifurcations :  2
Number of Branches :  5
Overall Width :  38.82 μm
Overall Height :  98.19 μm
Overall Depth :  7.93 μm
Average Diameter :  0.07 μm
Total Length :  221.6 μm
Total Surface :  48.73 μm2
Total Volume :  0.85 μm3
Max Euclidean Distance :  106.89 μm
Max Path Distance :  114.2 μm
Max Branch Order :  2
Average Contraction :  0.94
Total Fragmentation :  43
Partition Asymmetry :  0.5
Average Rall's Ratio :  2
Average Bifurcation Angle Local :  41.58°
Average Bifurcation Angle Remote :  29.49°
Fractal Dimension :  1.02

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