8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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Details about selected cell
NeuroMorpho.Org ID :  NMO_129666
Cell Name :  kd2-wt-18
Archive Name :  Guo_Xia
Species Name :  mouse
Strain :  Not reported
Structural Domains :  Dendrites, No Soma, No Axon
Physical Integrity :  Dendrites Complete
Morphological Attributes :  No Diameter, 2D, Angles
Min Age :  16.0 days
Max Age :  16.0 days
Gender :  Not reported
Min Weight :  Not reported
Max Weight :  Not reported
Development :  embryonic
Primary Brain Region :  neocortex
Secondary Brain Region :  somatosensory
Tertiary Brain Region :  primary somatosensory
Primary Cell Class :  principal cell
Secondary Cell Class :  pyramidal
Tertiary Cell Class :  Spiny, Star
Original Format :  NeuronJ.ndf
Experiment Protocol :  culture
Experimental Condition :  Csde1 knockdown + Csde1 (WT) rescue
Staining Method :  green fluorescent protein, immunostaining
Slicing Direction :  Not applicable
Slice Thickness :  Not applicable
Tissue Shrinkage :  Not reported
Objective Type :  dry
Magnification :  20x
Reconstruction Method :  NeuronJ
Date of Deposition :  2020-02-03
Date of Upload :  2020-06-29
Persistence Vector :  kd2-wt-18.pvec
Note :  Transfected at DIV5 and fixed at DIV15. The S1 area identification is putative

Reference Article
Related Article Reference :  Disruptive variants of CSDE1 associate with autism and interfere with neuronal development and synaptic transmission.

Measurements
Soma Surface :  N/A
Number of Stems :  2
Number of Bifurcations :  32
Number of Branches :  66
Overall Width :  273.68 μm
Overall Height :  834.01 μm
Overall Depth :  0 μm
Average Diameter :  1 μm
Total Length :  2804.42 μm
Total Surface :  8810.35 μm2
Total Volume :  2202.59 μm3
Max Euclidean Distance :  761.84 μm
Max Path Distance :  990.64 μm
Max Branch Order :  21
Average Contraction :  0.97
Total Fragmentation :  491
Partition Asymmetry :  0.81
Average Rall's Ratio :  2
Average Bifurcation Angle Local :  87.91°
Average Bifurcation Angle Remote :  88.34°
Fractal Dimension :  1.01

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