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| Details about selected cell |
| NeuroMorpho.Org ID : | NMO_115388 |
| Cell Name : | jy170517_A_idA |
| Archive Name : | Markram |
| Species Name : | rat |
| Strain : | Han Wistar |
| Structural Domains : | Dendrites, Soma, Axon |
| Physical Integrity : | Dendrites Complete, Axon Incomplete |
| Morphological Attributes : | Diameter, 3D, Angles |
| Min Age : | 16.0 days
|
| Max Age : | 16.0 days
|
| Gender : |
Female
|
| Min Weight : | 36.4 grams
|
| Max Weight : | 36.4 grams
|
| Development : | young adult |
| Primary Brain Region : | thalamus |
| Secondary Brain Region : | somatosensory thalamus |
| Tertiary Brain Region : | ventral posteromedial nucleus |
| Primary Cell Class : | principal cell |
| Secondary Cell Class : | thalamocortical |
| Tertiary Cell Class : | relay |
| Original Format : | Neurolucida.asc |
| Experiment Protocol : | in vitro |
| Experimental Condition : | Control |
| Staining Method : | biocytin |
| Slicing Direction : | horizontal |
| Slice Thickness : | 300
μm |
| Tissue Shrinkage : |
Reported 1.25% in z
Corrected 1.25% in z
|
| Objective Type : | oil |
| Magnification : | 100x |
| Reconstruction Method : | Neurolucida |
| Date of Deposition : | 2019-03-08 |
| Date of Upload : | 2019-12-13 |
| Persistence Vector : | jy170517_A_idA.pvec |
|
|
| Reference Article |
| Related Article Reference : | Experimentally-constrained biophysical models of tonic and burst firing modes in thalamocortical neurons. |
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|
| Measurements |
| Soma Surface : |
1786.59 μm2 |
| Number of Stems : |
9 |
| Number of Bifurcations : |
54 |
| Number of Branches : |
117 |
| Overall Width : |
170.79 μm |
| Overall Height : |
211.68 μm |
| Overall Depth : |
93.29 μm |
| Average Diameter : |
0.93 μm |
| Total Length : |
5999.1 μm |
| Total Surface : |
17999.7 μm2 |
| Total Volume : |
5683.93 μm3 |
| Max Euclidean Distance : |
150.1 μm |
| Max Path Distance : |
178.74 μm |
| Max Branch Order : |
6 |
| Average Contraction : |
0.87 |
| Total Fragmentation : |
5146 |
| Partition Asymmetry : |
0.46 |
| Average Rall's Ratio : |
1.21 |
| Average Bifurcation Angle Local : |
67.52° |
| Average Bifurcation Angle Remote : |
49.52° |
| Fractal Dimension : |
1.04 |
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