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| Details about selected cell |
| NeuroMorpho.Org ID : | NMO_115403 |
| Cell Name : | jy160704_A_idE |
| Archive Name : | Markram |
| Species Name : | rat |
| Strain : | Han Wistar |
| Structural Domains : | Dendrites, Soma, Axon |
| Physical Integrity : | Dendrites Complete, Axon Incomplete |
| Morphological Attributes : | Diameter, 3D, Angles |
| Min Age : | 15.0 days
|
| Max Age : | 15.0 days
|
| Gender : |
Female
|
| Min Weight : | 32 grams
|
| Max Weight : | 32 grams
|
| Development : | young adult |
| Primary Brain Region : | thalamus |
| Secondary Brain Region : | ventral posterolateral nucleus |
| Tertiary Brain Region : | Not reported |
| Primary Cell Class : | principal cell |
| Secondary Cell Class : | thalamocortical |
| Tertiary Cell Class : | relay |
| Original Format : | Neurolucida.asc |
| Experiment Protocol : | in vitro |
| Experimental Condition : | Control |
| Staining Method : | biocytin |
| Slicing Direction : | coronal |
| Slice Thickness : | 300
μm |
| Tissue Shrinkage : |
Reported 1.25% in z
Corrected 1.25% in z
|
| Objective Type : | oil |
| Magnification : | 100x |
| Reconstruction Method : | Neurolucida |
| Date of Deposition : | 2019-03-08 |
| Date of Upload : | 2019-12-13 |
| Persistence Vector : | jy160704_A_idE.pvec |
|
|
| Reference Article |
| Related Article Reference : | Experimentally-constrained biophysical models of tonic and burst firing modes in thalamocortical neurons. |
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|
| Measurements |
| Soma Surface : |
2400.83 μm2 |
| Number of Stems : |
11 |
| Number of Bifurcations : |
94 |
| Number of Branches : |
199 |
| Overall Width : |
195.72 μm |
| Overall Height : |
204.53 μm |
| Overall Depth : |
80.16 μm |
| Average Diameter : |
0.79 μm |
| Total Length : |
7596.31 μm |
| Total Surface : |
19649.9 μm2 |
| Total Volume : |
5388.64 μm3 |
| Max Euclidean Distance : |
146.34 μm |
| Max Path Distance : |
166.16 μm |
| Max Branch Order : |
10 |
| Average Contraction : |
0.85 |
| Total Fragmentation : |
7749 |
| Partition Asymmetry : |
0.48 |
| Average Rall's Ratio : |
1.12 |
| Average Bifurcation Angle Local : |
91.5° |
| Average Bifurcation Angle Remote : |
59.56° |
| Fractal Dimension : |
1.05 |
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