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| Details about selected cell |
| NeuroMorpho.Org ID : | NMO_115371 |
| Cell Name : | jy160629_B_idA |
| Archive Name : | Markram |
| Species Name : | rat |
| Strain : | Han Wistar |
| Structural Domains : | Dendrites, Soma, Axon |
| Physical Integrity : | Dendrites Complete, Axon Incomplete |
| Morphological Attributes : | Diameter, 3D, Angles |
| Min Age : | 16.0 days
|
| Max Age : | 16.0 days
|
| Gender : |
Male
|
| Min Weight : | 32 grams
|
| Max Weight : | 32 grams
|
| Development : | young adult |
| Primary Brain Region : | thalamus |
| Secondary Brain Region : | somatosensory thalamus |
| Tertiary Brain Region : | ventral posteromedial nucleus |
| Primary Cell Class : | principal cell |
| Secondary Cell Class : | thalamocortical |
| Tertiary Cell Class : | relay |
| Original Format : | Neurolucida.asc |
| Experiment Protocol : | in vitro |
| Experimental Condition : | Control |
| Staining Method : | biocytin |
| Slicing Direction : | coronal |
| Slice Thickness : | 300
μm |
| Tissue Shrinkage : |
Reported 1.25% in z
Corrected 1.25% in z
|
| Objective Type : | oil |
| Magnification : | 100x |
| Reconstruction Method : | Neurolucida |
| Date of Deposition : | 2019-03-08 |
| Date of Upload : | 2019-12-13 |
| Persistence Vector : | jy160629_B_idA.pvec |
|
|
| Reference Article |
| Related Article Reference : | Experimentally-constrained biophysical models of tonic and burst firing modes in thalamocortical neurons. |
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|
| Measurements |
| Soma Surface : |
2086.73 μm2 |
| Number of Stems : |
9 |
| Number of Bifurcations : |
56 |
| Number of Branches : |
121 |
| Overall Width : |
214.26 μm |
| Overall Height : |
262.19 μm |
| Overall Depth : |
135.79 μm |
| Average Diameter : |
0.95 μm |
| Total Length : |
6808.08 μm |
| Total Surface : |
22979.7 μm2 |
| Total Volume : |
10139.5 μm3 |
| Max Euclidean Distance : |
170.89 μm |
| Max Path Distance : |
209.16 μm |
| Max Branch Order : |
7 |
| Average Contraction : |
0.88 |
| Total Fragmentation : |
5202 |
| Partition Asymmetry : |
0.48 |
| Average Rall's Ratio : |
0.67 |
| Average Bifurcation Angle Local : |
83.89° |
| Average Bifurcation Angle Remote : |
51.48° |
| Fractal Dimension : |
1.03 |
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