8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_64193
Cell Name :  glia_4005
Archive Name :  Denk
Species Name :  mouse
Strain :  C57BL/6
Structural Domains :  Processes, No Soma
Physical Integrity :  Processes Moderate
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  30.0 days
Max Age :  30.0 days
Gender :  Not reported
Min Weight :  Not reported
Max Weight :  Not reported
Development :  young adult
Primary Brain Region :  retina
Secondary Brain Region :  Not reported
Tertiary Brain Region :  Not reported
Primary Cell Class :  Glia
Secondary Cell Class :  Not reported
Tertiary Cell Class :  Not reported
Original Format :  Knossos.swc
Experiment Protocol :  in vitro
Experimental Condition :  Control
Staining Method :  osmium and lead citrate
Slicing Direction :  Not reported
Slice Thickness :  0.025  μm
Tissue Shrinkage :  Reported 14%
Corrected (no values given)
Objective Type :  electron microscopy
Magnification :  Not reported
Reconstruction Method :  Knossos
Date of Deposition :  2015-01-10
Date of Upload :  2017-07-19
Persistence Vector :  glia_4005.pvec
Note :  Converted to SWC by jefferislab.org/si/nblast

Reference Article
Related Article Reference :  Connectomic reconstruction of the inner plexiform layer in the mouse retina.

Measurements
Soma Surface :  N/A
Number of Stems :  2
Number of Bifurcations :  4
Number of Branches :  10
Overall Width :  7.27 μm
Overall Height :  127.11 μm
Overall Depth :  11.13 μm
Average Diameter :  1.5 μm
Total Length :  197.21 μm
Total Surface :  929.35 μm2
Total Volume :  348.5 μm3
Max Euclidean Distance :  75.36 μm
Max Path Distance :  105.4 μm
Max Branch Order :  3
Average Contraction :  0.79
Total Fragmentation :  734
Partition Asymmetry :  0.4
Average Rall's Ratio :  2
Average Bifurcation Angle Local :  111.63°
Average Bifurcation Angle Remote :  95.71°
Fractal Dimension :  1.12

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