8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_64178
Cell Name :  glia_3987
Archive Name :  Denk
Species Name :  mouse
Strain :  C57BL/6
Structural Domains :  Processes, No Soma
Physical Integrity :  Processes Moderate
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  30.0 days
Max Age :  30.0 days
Gender :  Not reported
Min Weight :  Not reported
Max Weight :  Not reported
Development :  young adult
Primary Brain Region :  retina
Secondary Brain Region :  Not reported
Tertiary Brain Region :  Not reported
Primary Cell Class :  Glia
Secondary Cell Class :  Not reported
Tertiary Cell Class :  Not reported
Original Format :  Knossos.swc
Experiment Protocol :  in vitro
Experimental Condition :  Control
Staining Method :  osmium and lead citrate
Slicing Direction :  Not reported
Slice Thickness :  0.025  μm
Tissue Shrinkage :  Reported 14%
Corrected (no values given)
Objective Type :  electron microscopy
Magnification :  Not reported
Reconstruction Method :  Knossos
Date of Deposition :  2015-01-10
Date of Upload :  2017-07-19
Persistence Vector :  glia_3987.pvec
Note :  Converted to SWC by jefferislab.org/si/nblast

Reference Article
Related Article Reference :  Connectomic reconstruction of the inner plexiform layer in the mouse retina.

Measurements
Soma Surface :  N/A
Number of Stems :  2
Number of Bifurcations :  4
Number of Branches :  10
Overall Width :  19.2 μm
Overall Height :  124 μm
Overall Depth :  8.68 μm
Average Diameter :  1.5 μm
Total Length :  217.15 μm
Total Surface :  1023.3 μm2
Total Volume :  383.74 μm3
Max Euclidean Distance :  66.04 μm
Max Path Distance :  98.15 μm
Max Branch Order :  4
Average Contraction :  0.81
Total Fragmentation :  603
Partition Asymmetry :  0.47
Average Rall's Ratio :  2
Average Bifurcation Angle Local :  134.22°
Average Bifurcation Angle Remote :  115.17°
Fractal Dimension :  1.08

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