8.6.82 - Released: 2025-05-21 - Content: 275062 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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Details about selected cell
NeuroMorpho.Org ID :  NMO_01147
Cell Name :  gR004P1
Archive Name :  Svoboda
Species Name :  rat
Strain :  Sprague-Dawley
Structural Domains :  Dendrites, Soma, No Axon
Physical Integrity :  Dendrites Complete
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  0.0 day
Max Age :  36.0 days
Gender :  Not reported
Min Weight :  Not reported
Max Weight :  Not reported
Development :  young
Primary Brain Region :  neocortex
Secondary Brain Region :  somatosensory
Tertiary Brain Region :  layer 2-3
Primary Cell Class :  principal cell
Secondary Cell Class :  pyramidal
Tertiary Cell Class :  Not reported
Original Format :  Neurolucida.asc
Experiment Protocol :  in vitro
Experimental Condition :  Control
Staining Method :  Not reported
Slicing Direction :  Not reported
Slice Thickness :  300  μm
Tissue Shrinkage :  Not reported
Objective Type :  Not reported
Magnification :  60x
Reconstruction Method :  Neurolucida
Date of Deposition :  2005-12-31
Date of Upload :  2007-05-04
Persistence Vector :  gR004P1.pvec
Note :  From Barrel Cortex. When originally released, this reconstruction had been incompletely processed, and this issue was fixed in release 6.1 (May 2015). The pre-6.1 version of the processed file is available for download here.

Reference Article
Related Article Reference :  Laminar and columnar organization of ascending excitatory projections to layer 2/3 pyramidal neurons in rat barrel cortex

Measurements
Soma Surface :  914.48 μm2
Number of Stems :  5
Number of Bifurcations :  67
Number of Branches :  139
Overall Width :  436.89 μm
Overall Height :  526.86 μm
Overall Depth :  287.54 μm
Average Diameter :  1.08 μm
Total Length :  11155.1 μm
Total Surface :  37551.9 μm2
Total Volume :  14079 μm3
Max Euclidean Distance :  477.57 μm
Max Path Distance :  555.1 μm
Max Branch Order :  15
Average Contraction :  0.95
Total Fragmentation :  1098
Partition Asymmetry :  0.5
Average Rall's Ratio :  1.76
Average Bifurcation Angle Local :  56.95°
Average Bifurcation Angle Remote :  53.78°
Fractal Dimension :  1.02

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