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Details about selected cell |
NeuroMorpho.Org ID : | NMO_94662 |
Cell Name : | farsight1515 |
Archive Name : | Roysam |
Species Name : | rat |
Strain : | Not reported |
Structural Domains : | Processes, Soma |
Physical Integrity : | Processes Moderate |
Morphological Attributes : | Diameter, 3D, Angles |
Min Age : | Not reported
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Max Age : | Not reported
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Gender : |
Not reported
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Min Weight : | Not reported
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Max Weight : | Not reported
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Development : | not reported |
Primary Brain Region : | neocortex |
Secondary Brain Region : | frontal |
Tertiary Brain Region : | motor |
Primary Cell Class : | Glia |
Secondary Cell Class : | microglia |
Tertiary Cell Class : | Iba1-positive |
Original Format : | Farsight.swc |
Experiment Protocol : | in vitro |
Experimental Condition : | Control |
Staining Method : | immunostaining |
Slicing Direction : | coronal |
Slice Thickness : | 100
μm |
Tissue Shrinkage : |
Not reported
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Objective Type : | oil |
Magnification : | 30x |
Reconstruction Method : | Farsight |
Date of Deposition : | 2014-11-06 |
Date of Upload : | 2018-08-02 |
Persistence Vector : | farsight1515.pvec |
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Reference Article |
Related Article Reference : | Population-scale three-dimensional reconstruction and quantitative profiling of microglia arbors. |
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Measurements |
Soma Surface : |
202.75 μm2 |
Number of Stems : |
5 |
Number of Bifurcations : |
1 |
Number of Branches : |
7 |
Overall Width : |
32.1 μm |
Overall Height : |
16.25 μm |
Overall Depth : |
11.36 μm |
Average Diameter : |
1.2 μm |
Total Length : |
107.31 μm |
Total Surface : |
403.99 μm2 |
Total Volume : |
121.87 μm3 |
Max Euclidean Distance : |
20.77 μm |
Max Path Distance : |
24.58 μm |
Max Branch Order : |
1 |
Average Contraction : |
0.88 |
Total Fragmentation : |
174 |
Partition Asymmetry : |
0 |
Average Rall's Ratio : |
1.8 |
Average Bifurcation Angle Local : |
80.59° |
Average Bifurcation Angle Remote : |
53.56° |
Fractal Dimension : |
1.04 |
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