8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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Details about selected cell
NeuroMorpho.Org ID :  NMO_162066
Cell Name :  dIN-487-nrn-ns-100409-transl-invX-scaled-straightened
Archive Name :  Conte
Species Name :  Xenopus laevis
Strain :  Wildtype
Structural Domains :  Dendrites, Soma, Axon
Physical Integrity :  Dendrites & Axon Complete
Morphological Attributes :  Diameter, 3D, Angles
Min Age :  Not reported
Max Age :  Not reported
Gender :  Not reported
Min Weight :  Not reported
Max Weight :  Not reported
Development :  tadpole
Primary Brain Region :  spinal cord
Secondary Brain Region :  Not reported
Tertiary Brain Region :  Not reported
Primary Cell Class :  interneuron
Secondary Cell Class :  Descending
Tertiary Cell Class :  Not reported
Original Format :  LinLab.swc
Experiment Protocol :  in vivo
Experimental Condition :  Control
Staining Method :  Neurobiotin
Slicing Direction :  whole mount
Slice Thickness :  Not applicable
Tissue Shrinkage :  Reported 22%
Corrected 128%
Objective Type :  dry
Magnification :  40x
Reconstruction Method :  LinLab
Date of Deposition :  2021-05-08
Date of Upload :  2021-08-13
Persistence Vector :  dIN-487-nrn-ns-100409-transl-invX-scaled-straightened.pvec
Note :  Reconstruction was obtained from developmental stage 37-38. Neurons were dye-filled from whole-cell patch clamp electrophysiological recordings of individual cells in the tadpole swim network in pharmacologically anesthetized and immobilized animals.

Reference Article
Related Article Reference :  A simple method defines 3D morphology and axon projections of filled neurons in a small CNS volume: Steps toward understanding functional network circuitry.

Measurements
Soma Surface :  385.21 μm2
Number of Stems :  1
Number of Bifurcations :  3
Number of Branches :  7
Overall Width :  536.54 μm
Overall Height :  239.91 μm
Overall Depth :  12.1 μm
Average Diameter :  0.55 μm
Total Length :  643.92 μm
Total Surface :  759.03 μm2
Total Volume :  151.46 μm3
Max Euclidean Distance :  591.38 μm
Max Path Distance :  619.57 μm
Max Branch Order :  2
Average Contraction :  0.81
Total Fragmentation :  54
Partition Asymmetry :  0
Average Rall's Ratio :  1.31
Average Bifurcation Angle Local :  91.23°
Average Bifurcation Angle Remote :  42.73°
Fractal Dimension :  1.09

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