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| Details about selected cell |
| NeuroMorpho.Org ID : | NMO_144885 |
| Cell Name : | cs16_roi5_stacked |
| Archive Name : | Brennand |
| Species Name : | human |
| Strain : | Not applicable |
| Structural Domains : | Neurites, No Soma |
| Physical Integrity : | Neurites Moderate |
| Morphological Attributes : | No Diameter, 2D, Angles |
| Min Age : | 20.0 days
|
| Max Age : | 24.0 days
|
| Gender : |
Male
|
| Min Weight : | Not reported
|
| Max Weight : | Not reported
|
| Development : | fetus |
| Primary Brain Region : | Not reported |
| Secondary Brain Region : | Not reported |
| Tertiary Brain Region : | Not reported |
| Primary Cell Class : | principal cell |
| Secondary Cell Class : | induced pluripotent stem cell-(iPSC)-derived |
| Tertiary Cell Class : | Excitatory, Neurogenin-2 (NGN2) induced |
| Original Format : | Simple Neurite Tracer.traces |
| Experiment Protocol : | culture |
| Experimental Condition : | dCas9-VPR + TSNARE1 gRNA |
| Staining Method : | green fluorescent protein, immunostaining |
| Slicing Direction : | Not applicable |
| Slice Thickness : | Not applicable
|
| Tissue Shrinkage : |
Not reported
|
| Objective Type : | dry |
| Magnification : | 20x |
| Reconstruction Method : | Simple Neurite Tracer |
| Date of Deposition : | 2020-10-12 |
| Date of Upload : | 2020-11-18 |
| Persistence Vector : | cs16_roi5_stacked.pvec |
| Note : | This reconstruction belongs to C2 cell line. At day 6, very low titer of EF1a-eGFP lentivirus was added to a well either of dCas9-VPR effector NGN2-excitatory neurons with TSNARE1 gRNA. |
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| Reference Article |
| Related Article Reference : | Synergistic effects of common schizophrenia risk variants. |
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| Measurements |
| Soma Surface : |
N/A |
| Number of Stems : |
2 |
| Number of Bifurcations : |
8 |
| Number of Branches : |
18 |
| Overall Width : |
828.45 μm |
| Overall Height : |
120.52 μm |
| Overall Depth : |
0 μm |
| Average Diameter : |
0.25 μm |
| Total Length : |
1339.02 μm |
| Total Surface : |
1051.67 μm2 |
| Total Volume : |
65.73 μm3 |
| Max Euclidean Distance : |
687.04 μm |
| Max Path Distance : |
820.25 μm |
| Max Branch Order : |
5 |
| Average Contraction : |
0.92 |
| Total Fragmentation : |
696 |
| Partition Asymmetry : |
0.34 |
| Average Rall's Ratio : |
2 |
| Average Bifurcation Angle Local : |
73.78° |
| Average Bifurcation Angle Remote : |
77.84° |
| Fractal Dimension : |
1.03 |
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0
