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Details about selected cell |
NeuroMorpho.Org ID : | NMO_108794 |
Cell Name : | crop0_1_seg_split_5_1-25 |
Archive Name : | Dong |
Species Name : | mouse |
Strain : | C57BL/6J |
Structural Domains : | Dendrites, Soma, No Axon |
Physical Integrity : | Dendrites Complete |
Morphological Attributes : | Diameter, 3D, Angles |
Min Age : | 2.8 months
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Max Age : | 3.5 months
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Gender : |
Male
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Min Weight : | 25 grams
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Max Weight : | 28 grams
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Development : | adult |
Primary Brain Region : | neocortex |
Secondary Brain Region : | Not reported |
Tertiary Brain Region : | Not reported |
Primary Cell Class : | principal cell |
Secondary Cell Class : | pyramidal |
Tertiary Cell Class : | Not reported |
Original Format : | Neuronstudio.swc |
Experiment Protocol : | ex vivo |
Experimental Condition : | Control |
Staining Method : | Golgi-Cox |
Slicing Direction : | transverse |
Slice Thickness : | 100
μm |
Tissue Shrinkage : |
Not reported
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Objective Type : | dry |
Magnification : | 30x |
Reconstruction Method : | NeuronStudio |
Date of Deposition : | 2019-04-04 |
Date of Upload : | 2019-08-19 |
Persistence Vector : | crop0_1_seg_split_5_1-25.pvec |
Note : | Processed with G-Cut |
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Reference Article |
Related Article Reference : | Precise segmentation of densely interweaving neuron clusters using G-Cut. |
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Measurements |
Soma Surface : |
58.35 μm2 |
Number of Stems : |
7 |
Number of Bifurcations : |
36 |
Number of Branches : |
79 |
Overall Width : |
35.51 μm |
Overall Height : |
56.9 μm |
Overall Depth : |
20.26 μm |
Average Diameter : |
0.21 μm |
Total Length : |
650.46 μm |
Total Surface : |
479.35 μm2 |
Total Volume : |
36.02 μm3 |
Max Euclidean Distance : |
48.67 μm |
Max Path Distance : |
69.01 μm |
Max Branch Order : |
9 |
Average Contraction : |
0.81 |
Total Fragmentation : |
1682 |
Partition Asymmetry : |
0.58 |
Average Rall's Ratio : |
1.82 |
Average Bifurcation Angle Local : |
87.38° |
Average Bifurcation Angle Remote : |
74.62° |
Fractal Dimension : |
1.13 |
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