8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_79053
Cell Name :  combined_1
Archive Name :  Peng
Species Name :  human
Strain :  Not applicable
Structural Domains :  Neurites, No Soma
Physical Integrity :  Neurites Moderate
Morphological Attributes :  Diameter, 3D, Angles
Min Age :  Not reported
Max Age :  Not reported
Gender :  Not reported
Min Weight :  Not reported
Max Weight :  Not reported
Development :  not reported
Primary Brain Region :  neocortex
Secondary Brain Region :  Not reported
Tertiary Brain Region :  Not reported
Primary Cell Class :  principal cell
Secondary Cell Class :  pyramidal
Tertiary Cell Class :  Not reported
Original Format :  Vaa3D.swc
Experiment Protocol :  Not reported
Experimental Condition :  Control
Staining Method :  biocytin
Slicing Direction :  Not reported
Slice Thickness :  Not reported
Tissue Shrinkage :  Not reported
Objective Type :  Not reported
Magnification :  Not reported
Reconstruction Method :  Vaa3D
Date of Deposition :  2017-05-17
Date of Upload :  2017-11-28
Persistence Vector :  combined_1.pvec

Reference Article
Related Article Reference :  Fast assembling of neuron fragments in serial 3D sections.

Measurements
Soma Surface :  N/A
Number of Stems :  2
Number of Bifurcations :  208
Number of Branches :  418
Overall Width :  230.41 μm
Overall Height :  393.22 μm
Overall Depth :  438.33 μm
Average Diameter :  0.53 μm
Total Length :  10512.4 μm
Total Surface :  17312.2 μm2
Total Volume :  8671.84 μm3
Max Euclidean Distance :  361.63 μm
Max Path Distance :  427.6 μm
Max Branch Order :  21
Average Contraction :  0.9
Total Fragmentation :  8252
Partition Asymmetry :  0.56
Average Rall's Ratio :  2.34
Average Bifurcation Angle Local :  75.43°
Average Bifurcation Angle Remote :  71.54°
Fractal Dimension :  1.05

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