8.6.82 - Released: 2025-05-21 - Content: 275062 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_253092
Cell Name :  cell_wt_3
Archive Name :  Rosenberg
Species Name :  mouse
Strain :  B6129SF2/J
Structural Domains :  Dendrites, Soma, No Axon
Physical Integrity :  Dendrites Moderate
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  7.0 months
Max Age :  10.0 months
Gender :  Male
Min Weight :  Not reported
Max Weight :  Not reported
Development :  adult
Primary Brain Region :  subiculum
Secondary Brain Region :  Not reported
Tertiary Brain Region :  Not reported
Primary Cell Class :  principal cell
Secondary Cell Class :  pyramidal
Tertiary Cell Class :  Not reported
Original Format :  Imaris.swc
Experiment Protocol :  in vitro
Experimental Condition :  Control
Staining Method :  biocytin
Slicing Direction :  Sagittal
Slice Thickness :  300  μm
Tissue Shrinkage :  Not reported
Objective Type :  dry
Magnification :  20x
Reconstruction Method :  Imaris
Date of Deposition :  2023-01-18
Date of Upload :  2023-02-07
Persistence Vector :  cell_wt_3.pvec
Note :  WT mice were injected bilaterally in two sites in the hippocampus (site 1. Antero-posterior: -1 mm, mediolateral: +/-1.46 mm, ventral: -1.5 from bregma; site 2. Antero-posterior: -1.56 mm, mediolateral: +/-2.15 mm, ventral: -1.5 from bregma) with a virus encoding AAV9-mCherry. 3 microliters were injected at a rate of 100-200 nl/min at each injection site.

Reference Article
Related Article Reference :  Overexpression of UCP4 in astrocytic mitochondria prevents multilevel dysfunctions in a mouse model of Alzheimer''s disease.

Measurements
Soma Surface :  463.01 μm2
Number of Stems :  5
Number of Bifurcations :  47
Number of Branches :  99
Overall Width :  274.07 μm
Overall Height :  373.28 μm
Overall Depth :  26.49 μm
Average Diameter :  1.87 μm
Total Length :  3122.61 μm
Total Surface :  18391.4 μm2
Total Volume :  8622.65 μm3
Max Euclidean Distance :  249.29 μm
Max Path Distance :  407.16 μm
Max Branch Order :  11
Average Contraction :  0.93
Total Fragmentation :  3136
Partition Asymmetry :  0.53
Average Rall's Ratio :  1.98
Average Bifurcation Angle Local :  18.46°
Average Bifurcation Angle Remote :  64.08°
Fractal Dimension :  1.02

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