8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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Details about selected cell
NeuroMorpho.Org ID :  NMO_05811
Cell Name :  cell1-mbf-dend-axon
Archive Name :  Timofeev
Species Name :  cat
Strain :  Not reported
Structural Domains :  Dendrites, Soma, Axon
Physical Integrity :  Dendrites Complete, Axon Moderate
Morphological Attributes :  Diameter, 3D, Angles
Min Age :  Not reported
Max Age :  Not reported
Gender :  Male
Min Weight :  4200 grams
Max Weight :  4200 grams
Development :  adult
Primary Brain Region :  neocortex
Secondary Brain Region :  temporal
Tertiary Brain Region :  suprasylvian gyrus
Primary Cell Class :  principal cell
Secondary Cell Class :  pyramidal
Tertiary Cell Class :  Not reported
Original Format :  Neurolucida.asc
Experiment Protocol :  in vivo
Experimental Condition :  Control
Staining Method :  Neurobiotin
Slicing Direction :  parasagittal
Slice Thickness :  80  μm
Tissue Shrinkage :  Not reported
Objective Type :  oil
Magnification :  60x
Reconstruction Method :  Neurolucida
Date of Deposition :  2009-09-30
Date of Upload :  2010-11-05
Persistence Vector :  cell1-mbf-dend-axon.pvec
Note :  Cortical surface is towards the bottom of the reconstruction. When originally released, this reconstruction had been incompletely processed, and this issue was fixed in release 6.1 (May 2015). The pre-6.1 version of the processed file is available for download here.

Reference Article
Related Article Reference :  Precise long-range synchronization of activity and silence in neocortical neurons during slow-wave oscillations.

Measurements
Soma Surface :  865.4 μm2
Number of Stems :  6
Number of Bifurcations :  73
Number of Branches :  152
Overall Width :  2988.62 μm
Overall Height :  1931.96 μm
Overall Depth :  187.33 μm
Average Diameter :  0.52 μm
Total Length :  15947.2 μm
Total Surface :  26469.8 μm2
Total Volume :  8836.59 μm3
Max Euclidean Distance :  3257.8 μm
Max Path Distance :  3852.78 μm
Max Branch Order :  12
Average Contraction :  0.9
Total Fragmentation :  21155
Partition Asymmetry :  0.53
Average Rall's Ratio :  1.52
Average Bifurcation Angle Local :  70.34°
Average Bifurcation Angle Remote :  54.07°
Fractal Dimension :  1.02

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