8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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Details about selected cell
NeuroMorpho.Org ID :  NMO_142960
Cell Name :  b8-3_1
Archive Name :  Bruckner
Species Name :  zebrafish
Strain :  y321Et; UAS:GFP; mpeg1:mCherryTg heterozygotes
Structural Domains :  Neurites, No Soma
Physical Integrity :  Neurites Complete
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  14.0 days
Max Age :  14.0 days
Gender :  Not reported
Min Weight :  Not reported
Max Weight :  Not reported
Development :  larval
Primary Brain Region :  forebrain
Secondary Brain Region :  ventral telencephalon
Tertiary Brain Region :  Ventral nucleus
Primary Cell Class :  interneuron
Secondary Cell Class :  vTely321
Tertiary Cell Class :  Not reported
Original Format :  Imaris.swc
Experiment Protocol :  in vivo
Experimental Condition :  Germ-Free (GF)
Staining Method :  immunostaining
Slicing Direction :  Not reported
Slice Thickness :  1  μm
Tissue Shrinkage :  Not reported
Objective Type :  dry
Magnification :  40x
Reconstruction Method :  Imaris
Date of Deposition :  2020-10-02
Date of Upload :  2020-11-02
Persistence Vector :  b8-3_1.pvec
Note :  This interneuron type is defined by partial enhancer trap of lhx8a, correspond to social orienting and place preference cells

Reference Article
Related Article Reference :  The microbiota promotes social behavior by neuro-immune modulation of neurite complexity

Measurements
Soma Surface :  N/A
Number of Stems :  2
Number of Bifurcations :  6
Number of Branches :  14
Overall Width :  6.04 μm
Overall Height :  20.04 μm
Overall Depth :  17.6 μm
Average Diameter :  0.55 μm
Total Length :  73.25 μm
Total Surface :  126.23 μm2
Total Volume :  18.09 μm3
Max Euclidean Distance :  18.77 μm
Max Path Distance :  29.14 μm
Max Branch Order :  6
Average Contraction :  0.9
Total Fragmentation :  290
Partition Asymmetry :  0.67
Average Rall's Ratio :  1.86
Average Bifurcation Angle Local :  84.98°
Average Bifurcation Angle Remote :  95.24°
Fractal Dimension :  1.04

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