8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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Details about selected cell
NeuroMorpho.Org ID :  NMO_142877
Cell Name :  b5-6
Archive Name :  Bruckner
Species Name :  zebrafish
Strain :  y321Et; UAS:GFP; mpeg1:mCherryTg heterozygotes
Structural Domains :  Neurites, No Soma
Physical Integrity :  Neurites Complete
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  14.0 days
Max Age :  14.0 days
Gender :  Not reported
Min Weight :  Not reported
Max Weight :  Not reported
Development :  larval
Primary Brain Region :  forebrain
Secondary Brain Region :  ventral telencephalon
Tertiary Brain Region :  Ventral nucleus
Primary Cell Class :  interneuron
Secondary Cell Class :  vTely321
Tertiary Cell Class :  Not reported
Original Format :  Imaris.swc
Experiment Protocol :  in vivo
Experimental Condition :  Germ-Free (GF)
Staining Method :  immunostaining
Slicing Direction :  Not reported
Slice Thickness :  1  μm
Tissue Shrinkage :  Not reported
Objective Type :  dry
Magnification :  40x
Reconstruction Method :  Imaris
Date of Deposition :  2020-10-02
Date of Upload :  2020-11-02
Persistence Vector :  b5-6.pvec
Note :  This interneuron type is defined by partial enhancer trap of lhx8a, correspond to social orienting and place preference cells

Reference Article
Related Article Reference :  The microbiota promotes social behavior by neuro-immune modulation of neurite complexity

Measurements
Soma Surface :  N/A
Number of Stems :  1
Number of Bifurcations :  11
Number of Branches :  23
Overall Width :  16.87 μm
Overall Height :  56.62 μm
Overall Depth :  18.27 μm
Average Diameter :  0.5 μm
Total Length :  209.89 μm
Total Surface :  329.69 μm2
Total Volume :  41.21 μm3
Max Euclidean Distance :  64.06 μm
Max Path Distance :  77.08 μm
Max Branch Order :  6
Average Contraction :  0.92
Total Fragmentation :  908
Partition Asymmetry :  0.59
Average Rall's Ratio :  2
Average Bifurcation Angle Local :  121.77°
Average Bifurcation Angle Remote :  71.28°
Fractal Dimension :  1.03

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