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| Details about selected cell |
| NeuroMorpho.Org ID : | NMO_172996 |
| Cell Name : | axon04_LS |
| Archive Name : | Zhuang |
| Species Name : | mouse |
| Strain : | C57BL/6 |
| Structural Domains : | No Dendrites, No Soma, Axon |
| Physical Integrity : | Axon Complete |
| Morphological Attributes : | No Diameter, 3D, Angles |
| Min Age : | 100.0 days
|
| Max Age : | 136.0 days
|
| Gender : |
Male/Female
|
| Min Weight : | Not reported
|
| Max Weight : | Not reported
|
| Development : | adult |
| Primary Brain Region : | thalamus |
| Secondary Brain Region : | lateral geniculate nucleus |
| Tertiary Brain Region : | dorsal |
| Primary Cell Class : | principal cell |
| Secondary Cell Class : | projection |
| Tertiary Cell Class : | location sensitive, primary visual cortex (V1)-projecting |
| Original Format : | Vaa3D.swc |
| Experiment Protocol : | in vivo |
| Experimental Condition : | Control |
| Staining Method : | GCaMP |
| Slicing Direction : | tangential |
| Slice Thickness : | 350
μm |
| Tissue Shrinkage : |
Not reported
|
| Objective Type : | oil |
| Magnification : | 30x |
| Reconstruction Method : | Vaa3D |
| Date of Deposition : | 2021-10-25 |
| Date of Upload : | 2022-01-11 |
| Persistence Vector : | axon04_LS.pvec |
| Note : | In the downloadable Morphology File (Original) the pia surface is at the top and the white matter at the bottom |
|
|
| Reference Article |
| Related Article Reference : | Laminar distribution and arbor density of two functional classes of thalamic inputs to primary visual cortex. |
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|
| Measurements |
| Soma Surface : |
N/A |
| Number of Stems : |
1 |
| Number of Bifurcations : |
64 |
| Number of Branches : |
129 |
| Overall Width : |
734.11 μm |
| Overall Height : |
909.79 μm |
| Overall Depth : |
349.52 μm |
| Average Diameter : |
1.69 μm |
| Total Length : |
18320.5 μm |
| Total Surface : |
98118.2 μm2 |
| Total Volume : |
44810.8 μm3 |
| Max Euclidean Distance : |
1164.31 μm |
| Max Path Distance : |
1691.19 μm |
| Max Branch Order : |
15 |
| Average Contraction : |
0.87 |
| Total Fragmentation : |
7369 |
| Partition Asymmetry : |
0.45 |
| Average Rall's Ratio : |
2.15 |
| Average Bifurcation Angle Local : |
80.33° |
| Average Bifurcation Angle Remote : |
67.17° |
| Fractal Dimension : |
1.03 |
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