8.6.82 - Released: 2025-05-21 - Content: 275062 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_258262
Cell Name :  asl-rhin-CD4-40_0004-2_01
Archive Name :  Liao
Species Name :  rat
Strain :  Sprague-Dawley
Structural Domains :  Neurites, Soma
Physical Integrity :  Neurites Complete
Morphological Attributes :  No Diameter, 2D, Angles
Min Age :  18.0 days
Max Age :  18.0 days
Gender :  Not reported
Min Weight :  Not reported
Max Weight :  Not reported
Development :  embryonic
Primary Brain Region :  hippocampus
Secondary Brain Region :  Not reported
Tertiary Brain Region :  Not reported
Primary Cell Class :  principal cell
Secondary Cell Class :  pyramidal
Tertiary Cell Class :  Not reported
Original Format :  NeuronJ.ndf
Experiment Protocol :  culture
Experimental Condition :  Control
Staining Method :  Not reported
Slicing Direction :  Not applicable
Slice Thickness :  Not applicable
Tissue Shrinkage :  Not reported
Objective Type :  dry
Magnification :  40x
Reconstruction Method :  NeuronJ
Date of Deposition :  2022-09-14
Date of Upload :  2023-04-27
Persistence Vector :  asl-rhin-CD4-40_0004-2_01.pvec
Note :  This reconstruction was obtained after 40 days in vitro.

Reference Article
Related Article Reference :  Semi-Automated Quantitative Evaluation of Neuron Developmental Morphology In Vitro Using the Change-Point Test.

Measurements
Soma Surface :  5.66 μm2
Number of Stems :  4
Number of Bifurcations :  1
Number of Branches :  6
Overall Width :  11.33 μm
Overall Height :  5.77 μm
Overall Depth :  0 μm
Average Diameter :  1 μm
Total Length :  27.64 μm
Total Surface :  86.84 μm2
Total Volume :  21.71 μm3
Max Euclidean Distance :  10.05 μm
Max Path Distance :  11.01 μm
Max Branch Order :  1
Average Contraction :  0.93
Total Fragmentation :  180
Partition Asymmetry :  0
Average Rall's Ratio :  2
Average Bifurcation Angle Local :  36.21°
Average Bifurcation Angle Remote :  66.01°
Fractal Dimension :  1.04

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