8.6.82 - Released: 2025-05-21 - Content: 275062 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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Details about selected cell
NeuroMorpho.Org ID :  NMO_296505
Cell Name :  annotation1333_j
Archive Name :  Kasthuri
Species Name :  mouse
Strain :  Rbp4-Cre
Structural Domains :  Dendrites, No Soma, No Axon
Physical Integrity :  Dendrites Incomplete
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  149.0 days
Max Age :  149.0 days
Gender :  Male
Min Weight :  Not reported
Max Weight :  Not reported
Development :  adult
Primary Brain Region :  basal ganglia
Secondary Brain Region :  striatum
Tertiary Brain Region :  lateral
Primary Cell Class :  principal cell
Secondary Cell Class :  medium spiny
Tertiary Cell Class :  projection
Original Format :  TrakEm2.xml
Experiment Protocol :  in vitro
Experimental Condition :  Control
Staining Method :  osmium tetroxide/uranyl acetate
Slicing Direction :  oblique coronal
Slice Thickness :  350  μm
Tissue Shrinkage :  Not reported
Objective Type :  electron microscopy
Magnification :  Not reported
Reconstruction Method :  TrakEm2
Date of Deposition :  2025-02-27
Date of Upload :  2025-03-12
Persistence Vector :  annotation1333_j.pvec
Note :  One transgenic mouse was injected with AAV-APX-C and AAV-APX-M in M1 and S1, respectively, AAV-APX-M in S1 and M1, and the injections were reversed in a second Rbp4-cre mouse to place AAV-APX-C and AAV-APX-M in S1 and M1, respectively. Heavy metals staining for electron microscopy was preceded by DAB staining

Reference Article
Related Article Reference :  Synaptic integration of somatosensory and motor cortical inputs onto spiny projection neurons of mice caudoputamen.

Measurements
Soma Surface :  N/A
Number of Stems :  2
Number of Bifurcations :  2
Number of Branches :  6
Overall Width :  10.61 μm
Overall Height :  72.21 μm
Overall Depth :  4.35 μm
Average Diameter :  1 μm
Total Length :  89.84 μm
Total Surface :  282.25 μm2
Total Volume :  70.56 μm3
Max Euclidean Distance :  45.02 μm
Max Path Distance :  50.53 μm
Max Branch Order :  3
Average Contraction :  0.91
Total Fragmentation :  63
Partition Asymmetry :  0.67
Average Rall's Ratio :  2
Average Bifurcation Angle Local :  111.74°
Average Bifurcation Angle Remote :  88.03°
Fractal Dimension :  1.02

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