8.6.82 - Released: 2025-05-21 - Content: 275062 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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Details about selected cell
NeuroMorpho.Org ID :  NMO_296479
Cell Name :  annotation1333_a
Archive Name :  Kasthuri
Species Name :  mouse
Strain :  Rbp4-Cre
Structural Domains :  Dendrites, Soma, No Axon
Physical Integrity :  Dendrites Incomplete
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  149.0 days
Max Age :  149.0 days
Gender :  Male
Min Weight :  Not reported
Max Weight :  Not reported
Development :  adult
Primary Brain Region :  basal ganglia
Secondary Brain Region :  striatum
Tertiary Brain Region :  lateral
Primary Cell Class :  principal cell
Secondary Cell Class :  medium spiny
Tertiary Cell Class :  projection
Original Format :  TrakEm2.xml
Experiment Protocol :  in vitro
Experimental Condition :  Control
Staining Method :  osmium tetroxide/uranyl acetate
Slicing Direction :  oblique coronal
Slice Thickness :  350  μm
Tissue Shrinkage :  Not reported
Objective Type :  electron microscopy
Magnification :  Not reported
Reconstruction Method :  TrakEm2
Date of Deposition :  2025-02-27
Date of Upload :  2025-03-12
Persistence Vector :  annotation1333_a.pvec
Note :  One transgenic mouse was injected with AAV-APX-C and AAV-APX-M in M1 and S1, respectively, AAV-APX-M in S1 and M1, and the injections were reversed in a second Rbp4-cre mouse to place AAV-APX-C and AAV-APX-M in S1 and M1, respectively. Heavy metals staining for electron microscopy was preceded by DAB staining

Reference Article
Related Article Reference :  Synaptic integration of somatosensory and motor cortical inputs onto spiny projection neurons of mice caudoputamen.

Measurements
Soma Surface :  1013.16 μm2
Number of Stems :  5
Number of Bifurcations :  17
Number of Branches :  39
Overall Width :  104.6 μm
Overall Height :  127.22 μm
Overall Depth :  38.77 μm
Average Diameter :  1 μm
Total Length :  576.12 μm
Total Surface :  1809.94 μm2
Total Volume :  452.49 μm3
Max Euclidean Distance :  100.39 μm
Max Path Distance :  114.96 μm
Max Branch Order :  5
Average Contraction :  0.91
Total Fragmentation :  272
Partition Asymmetry :  0.29
Average Rall's Ratio :  2
Average Bifurcation Angle Local :  79.12°
Average Bifurcation Angle Remote :  83.02°
Fractal Dimension :  1.04

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