8.6.82 - Released: 2025-05-21 - Content: 275062 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_170934
Cell Name :  annotation-20211123T1354
Archive Name :  Wildenberg_Kasthuri
Species Name :  mouse
Strain :  C56BL/6J
Structural Domains :  Neurites, No Soma
Physical Integrity :  Neurites Moderate
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  105.0 days
Max Age :  105.0 days
Gender :  Male
Min Weight :  Not reported
Max Weight :  Not reported
Development :  adult
Primary Brain Region :  neocortex
Secondary Brain Region :  occipital
Tertiary Brain Region :  primary visual
Primary Cell Class :  principal cell
Secondary Cell Class :  Excitatory
Tertiary Cell Class :  Not reported
Original Format :  Knossos.nml
Experiment Protocol :  in vivo
Experimental Condition :  Control
Staining Method :  Not reported
Slicing Direction :  coronal
Slice Thickness :  0.04  μm
Tissue Shrinkage :  Not reported
Objective Type :  electron microscopy
Magnification :  Not reported
Reconstruction Method :  Knossos
Date of Deposition :  2021-11-30
Date of Upload :  2021-12-15
Persistence Vector :  annotation-20211123T1354.pvec
Note :  This reconstruction includes excitatory and inhibitory neurons from the primary visual cortex.

Reference Article
Related Article Reference :  Primate neuronal connections are sparse in cortex as compared to mouse.

Measurements
Soma Surface :  N/A
Number of Stems :  2
Number of Bifurcations :  732
Number of Branches :  1466
Overall Width :  66.32 μm
Overall Height :  668.43 μm
Overall Depth :  241.29 μm
Average Diameter :  0.25 μm
Total Length :  29611.3 μm
Total Surface :  23256.7 μm2
Total Volume :  1453.54 μm3
Max Euclidean Distance :  696.24 μm
Max Path Distance :  1736.87 μm
Max Branch Order :  89
Average Contraction :  0.96
Total Fragmentation :  8707
Partition Asymmetry :  0.6
Average Rall's Ratio :  2
Average Bifurcation Angle Local :  98.53°
Average Bifurcation Angle Remote :  92.9°
Fractal Dimension :  1.02

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