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Details about selected cell |
NeuroMorpho.Org ID : | NMO_63352 |
Cell Name : | amf_213 |
Archive Name : | Denk |
Species Name : | mouse |
Strain : | C57BL/6 |
Structural Domains : | Neurites, No Soma |
Physical Integrity : | Neurites Moderate |
Morphological Attributes : | Diameter, 3D, Angles |
Min Age : | 30.0 days
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Max Age : | 30.0 days
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Gender : |
Not reported
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Min Weight : | Not reported
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Max Weight : | Not reported
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Development : | young adult |
Primary Brain Region : | retina |
Secondary Brain Region : | Not reported |
Tertiary Brain Region : | Not reported |
Primary Cell Class : | interneuron |
Secondary Cell Class : | amacrine |
Tertiary Cell Class : | medium-field |
Original Format : | Knossos.swc |
Experiment Protocol : | in vitro |
Experimental Condition : | Control |
Staining Method : | osmium and lead citrate |
Slicing Direction : | Not reported |
Slice Thickness : | 0.025
μm |
Tissue Shrinkage : |
Reported 14%
Corrected (no values given)
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Objective Type : | electron microscopy |
Magnification : | Not reported
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Reconstruction Method : | Knossos |
Date of Deposition : | 2015-01-10 |
Date of Upload : | 2017-07-19 |
Persistence Vector : | amf_213.pvec |
Note : | Converted to SWC by jefferislab.org/si/nblast |
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Reference Article |
Related Article Reference : | Connectomic reconstruction of the inner plexiform layer in the mouse retina. |
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Measurements |
Soma Surface : |
N/A |
Number of Stems : |
2 |
Number of Bifurcations : |
449 |
Number of Branches : |
900 |
Overall Width : |
17.52 μm |
Overall Height : |
88.23 μm |
Overall Depth : |
58.17 μm |
Average Diameter : |
1.5 μm |
Total Length : |
1539.44 μm |
Total Surface : |
7254.45 μm2 |
Total Volume : |
2720.42 μm3 |
Max Euclidean Distance : |
56.07 μm |
Max Path Distance : |
160.41 μm |
Max Branch Order : |
71 |
Average Contraction : |
0.88 |
Total Fragmentation : |
5022 |
Partition Asymmetry : |
0.8 |
Average Rall's Ratio : |
2 |
Average Bifurcation Angle Local : |
103.56° |
Average Bifurcation Angle Remote : |
92.45° |
Fractal Dimension : |
1.12 |
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