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Details about selected cell |
NeuroMorpho.Org ID : | NMO_69908 |
Cell Name : | YF12002_4001-5000_bright452 |
Archive Name : | Zeng |
Species Name : | mouse |
Strain : | Thy1-YFP-H |
Structural Domains : | Dendrites, Soma, No Axon |
Physical Integrity : | Dendrites Moderate |
Morphological Attributes : | No Diameter, 3D, Angles |
Min Age : | 21.0 days
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Max Age : | 21.0 days
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Gender : |
Male
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Min Weight : | 10.77 grams
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Max Weight : | 10.77 grams
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Development : | young adult |
Primary Brain Region : | neocortex |
Secondary Brain Region : | Not reported |
Tertiary Brain Region : | Not reported |
Primary Cell Class : | principal cell |
Secondary Cell Class : | pyramidal |
Tertiary Cell Class : | Not reported |
Original Format : | NeuroGPS-Tree.swc |
Experiment Protocol : | in vitro |
Experimental Condition : | Control |
Staining Method : | yellow fluorescent protein |
Slicing Direction : | coronal |
Slice Thickness : | 1
μm |
Tissue Shrinkage : |
Not reported
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Objective Type : | Not reported |
Magnification : | Not reported
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Reconstruction Method : | NeuroGPS-Tree |
Date of Deposition : | 2015-01-16 |
Date of Upload : | 2017-07-19 |
Persistence Vector : | YF12002_4001-5000_bright452.pvec |
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Reference Article |
Related Article Reference : | NeuroGPS-Tree: automatic reconstruction of large-scale neuronal populations with dense neurites. |
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Measurements |
Soma Surface : |
1994.6 μm2 |
Number of Stems : |
15 |
Number of Bifurcations : |
29 |
Number of Branches : |
73 |
Overall Width : |
240.55 μm |
Overall Height : |
528.07 μm |
Overall Depth : |
142.07 μm |
Average Diameter : |
1 μm |
Total Length : |
3741.41 μm |
Total Surface : |
11754 μm2 |
Total Volume : |
2938.49 μm3 |
Max Euclidean Distance : |
498.99 μm |
Max Path Distance : |
576.45 μm |
Max Branch Order : |
9 |
Average Contraction : |
0.84 |
Total Fragmentation : |
3579 |
Partition Asymmetry : |
0.44 |
Average Rall's Ratio : |
2 |
Average Bifurcation Angle Local : |
49.72° |
Average Bifurcation Angle Remote : |
84.19° |
Fractal Dimension : |
1.05 |
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