8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_191296
Cell Name :  WvHMM12_18DIV_cs_97_c__10_PSD95_GFP
Archive Name :  Bastian
Species Name :  mouse
Strain :  CD1
Structural Domains :  Dendrites, Soma, No Axon
Physical Integrity :  Dendrites Complete
Morphological Attributes :  No Diameter, 2D, Angles
Min Age :  16.0 days
Max Age :  16.0 days
Gender :  Male/Female
Min Weight :  Not reported
Max Weight :  Not reported
Development :  embryonic
Primary Brain Region :  hippocampus
Secondary Brain Region :  Not reported
Tertiary Brain Region :  Not reported
Primary Cell Class :  principal cell
Secondary Cell Class :  Pyramidal-like
Tertiary Cell Class :  Microtubule-associated protein 2 (MAP2)-positive
Original Format :  Simple Neurite Tracer.traces
Experiment Protocol :  culture
Experimental Condition :  iron-deficient
Staining Method :  green fluorescent protein
Slicing Direction :  Not applicable
Slice Thickness :  Not applicable
Tissue Shrinkage :  Not reported
Objective Type :  dry
Magnification :  20x
Reconstruction Method :  Simple Neurite Tracer
Date of Deposition :  2022-06-09
Date of Upload :  2022-06-24
Persistence Vector :  WvHMM12_18DIV_cs_97_c__10_PSD95_GFP.pvec
Note :  Neuronal iron deficiency was created beginning at 3 DIV by treating cultures with 9 micromolar deferoxamine.

Reference Article
Related Article Reference :  Choline Supplementation Partially Restores Dendrite Structural Complexity in Developing Iron-Deficient Mouse Hippocampal Neurons.

Measurements
Soma Surface :  313.59 μm2
Number of Stems :  4
Number of Bifurcations :  18
Number of Branches :  40
Overall Width :  222.96 μm
Overall Height :  282.4 μm
Overall Depth :  0 μm
Average Diameter :  0.25 μm
Total Length :  1699.78 μm
Total Surface :  1335.01 μm2
Total Volume :  83.44 μm3
Max Euclidean Distance :  195.05 μm
Max Path Distance :  226.67 μm
Max Branch Order :  5
Average Contraction :  0.94
Total Fragmentation :  4573
Partition Asymmetry :  0.53
Average Rall's Ratio :  2
Average Bifurcation Angle Local :  30.84°
Average Bifurcation Angle Remote :  49.74°
Fractal Dimension :  1.02

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