8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_256008
Cell Name :  WT_shCTRL-59_01
Archive Name :  Eickholt
Species Name :  mouse
Strain :  Bl6/NCrl
Structural Domains :  Neurites, Soma
Physical Integrity :  Neurites Complete
Morphological Attributes :  No Diameter, 2D, Angles
Min Age :  16.5 days
Max Age :  16.5 days
Gender :  Male/Female
Min Weight :  Not reported
Max Weight :  Not reported
Development :  embryonic
Primary Brain Region :  hippocampus
Secondary Brain Region :  Not reported
Tertiary Brain Region :  Not reported
Primary Cell Class :  principal cell
Secondary Cell Class :  Not reported
Tertiary Cell Class :  Not reported
Original Format :  NeuronJ.ndf
Experiment Protocol :  culture
Experimental Condition :  Control
Staining Method :  green fluorescent protein
Slicing Direction :  Not applicable
Slice Thickness :  Not applicable
Tissue Shrinkage :  Not reported
Objective Type :  dry
Magnification :  40x
Reconstruction Method :  NeuronJ
Date of Deposition :  2022-10-24
Date of Upload :  2023-03-29
Persistence Vector :  WT_shCTRL-59_01.pvec
Note :  This reconstruction was obtained from a culture infected with control shRNA. Raw images and quantifications accessible under CC BY 4.0 at: https://doi.org/10.6084/m9.figshare.21383724

Reference Article
Related Article Reference :  The Axonal Membrane Protein PRG2 Inhibits PTEN and Directs Growth to Branches.

Measurements
Soma Surface :  23765.8 μm2
Number of Stems :  6
Number of Bifurcations :  4
Number of Branches :  14
Overall Width :  685.14 μm
Overall Height :  433.58 μm
Overall Depth :  0 μm
Average Diameter :  1 μm
Total Length :  3036.23 μm
Total Surface :  9538.6 μm2
Total Volume :  2384.65 μm3
Max Euclidean Distance :  589.8 μm
Max Path Distance :  1613.04 μm
Max Branch Order :  2
Average Contraction :  0.9
Total Fragmentation :  505
Partition Asymmetry :  0
Average Rall's Ratio :  2
Average Bifurcation Angle Local :  45.36°
Average Bifurcation Angle Remote :  41.49°
Fractal Dimension :  1.02

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