8.6.96 - Released: 2025-11-05 - Content: 284158 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



3D Cell Viewer - Java, legacy
3D Cell Viewer - WebGL, novel
Animation
Similar Neurons
Details about selected cell
NeuroMorpho.Org ID :  NMO_159291
Cell Name :  WT1201-Ect-R-7101-fiber02
Archive Name :  Zhang_Jiang
Species Name :  mouse
Strain :  C57BL/6
Structural Domains :  Dendrites, Soma, No Axon
Physical Integrity :  Dendrites Complete
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  12.0 months
Max Age :  12.0 months
Gender :  Male
Min Weight :  Not reported
Max Weight :  Not reported
Development :  adult
Primary Brain Region :  entorhinal cortex
Secondary Brain Region :  right
Tertiary Brain Region :  Not reported
Primary Cell Class :  principal cell
Secondary Cell Class :  pyramidal
Tertiary Cell Class :  Not reported
Original Format :  Amira.swc
Experiment Protocol :  in vitro
Experimental Condition :  Control
Staining Method :  Golgi-Cox
Slicing Direction :  coronal
Slice Thickness :  50  μm
Tissue Shrinkage :  Not reported
Objective Type :  Not reported
Magnification :  40x
Reconstruction Method :  Amira
Date of Deposition :  2020-01-31
Date of Upload :  2021-07-16
Persistence Vector :  WT1201-Ect-R-7101-fiber02.pvec
Note :  A block size of 600 x 600 x 600 cubic micrometers was chosen in the brain for statistical analysis of the parameters of neuronal morphology. The position of the entorhinal cortex was located in the following stereotaxic coordinates: Bregma, -4.04; -5.02 mm.

Reference Article
Related Article Reference :  Dendritic complexity change in the triple transgenic mouse model of Alzheimer's disease.

Measurements
Soma Surface :  291.95 μm2
Number of Stems :  7
Number of Bifurcations :  5
Number of Branches :  17
Overall Width :  96.75 μm
Overall Height :  130.42 μm
Overall Depth :  33.9 μm
Average Diameter :  0.44 μm
Total Length :  744.21 μm
Total Surface :  1034.09 μm2
Total Volume :  128.19 μm3
Max Euclidean Distance :  97.07 μm
Max Path Distance :  113.29 μm
Max Branch Order :  2
Average Contraction :  0.89
Total Fragmentation :  472
Partition Asymmetry :  0.2
Average Rall's Ratio :  6.54
Average Bifurcation Angle Local :  24.62°
Average Bifurcation Angle Remote :  45.43°
Fractal Dimension :  1.03

© Copyright 2006-2025   George Mason University All Rights Reserved.   Link Graphic to NIF website