Detailed Cell Information: Trh-F-000006

8.6.82 - Released: 2025-05-21 - Content: 275062 cells


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Details about selected cell

NeuroMorpho.Org ID :	NMO_42478
Cell Name :	Trh-F-000006
Archive Name :	Chiang
Species Name :	drosophila melanogaster
Strain :	Trh-Gal4
Structural Domains :	No Dendrites, No Soma, Axon
Physical Integrity :	Axon Complete
Morphological Attributes :	No Diameter, 3D, Angles
Min Age :	5.0 days
Max Age :	15.0 days
Gender :	Female
Min Weight :	Not reported
Max Weight :	Not reported
Development :	adult
Primary Brain Region :	optic lobe
Secondary Brain Region :	medulla
Tertiary Brain Region :	Right Medulla
Primary Cell Class :	interneuron
Secondary Cell Class :	serotonergic
Tertiary Cell Class :	Embryo-born
Original Format :	Custom.swc
Experiment Protocol :	in vivo
Experimental Condition :	Control
Staining Method :	green fluorescent protein
Slicing Direction :	whole mount
Slice Thickness :	Not applicable
Tissue Shrinkage :	Not reported
Objective Type :	water
Magnification :	40x
Reconstruction Method :	Custom
Date of Deposition :	2016-07-19
Date of Upload :	2016-09-01
Persistence Vector :	Trh-F-000006.pvec
Note :	Brain regions were assigned based on a fly brain atlas, whereas cell types were induced using a machine learning process using available metadata and previous cell type assignments. Details of both are described here.

Reference Article

Related Article Reference :	Connectomics-based analysis of information flow in the Drosophila brain.

Measurements

Soma Surface :	3.14 μm²
Number of Stems :	1
Number of Bifurcations :	8
Number of Branches :	17
Overall Width :	33.98 μm
Overall Height :	170.12 μm
Overall Depth :	13.57 μm
Average Diameter :	1 μm
Total Length :	392.98 μm
Total Surface :	1234.58 μm²
Total Volume :	308.65 μm³
Max Euclidean Distance :	172.65 μm
Max Path Distance :	255.61 μm
Max Branch Order :	4
Average Contraction :	0.71
Total Fragmentation :	88
Partition Asymmetry :	0.18
Average Rall's Ratio :	2
Average Bifurcation Angle Local :	72.36°
Average Bifurcation Angle Remote :	82.45°
Fractal Dimension :	1.19