8.6.82 - Released: 2025-05-21 - Content: 275062 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_100259
Cell Name :  Tracetest_N360_square_Betatub_5_semi-auto_16
Archive Name :  Kuddannaya
Species Name :  rat
Strain :  Sprague-Dawley
Structural Domains :  Dendrites, Soma, No Axon
Physical Integrity :  Dendrites Moderate
Morphological Attributes :  Diameter, 2D, Angles
Min Age :  1.0 day
Max Age :  1.0 day
Gender :  Not reported
Min Weight :  Not reported
Max Weight :  Not reported
Development :  neonatal
Primary Brain Region :  neocortex
Secondary Brain Region :  frontal
Tertiary Brain Region :  Not reported
Primary Cell Class :  principal cell
Secondary Cell Class :  Not reported
Tertiary Cell Class :  Not reported
Original Format :  Neurolucida.dat
Experiment Protocol :  in vitro
Experimental Condition :  square micro-pattern plating
Staining Method :  immunostaining
Slicing Direction :  Not applicable
Slice Thickness :  Not applicable
Tissue Shrinkage :  Not reported
Objective Type :  water
Magnification :  10x
Reconstruction Method :  Neurolucida
Date of Deposition :  2018-06-21
Date of Upload :  2018-11-27
Persistence Vector :  Tracetest_N360_square_Betatub_5_semi-auto_16.pvec
Note :  Plated on polydimethylsiloxane supports and incubated with Beta-III Tubulin antibody.

Reference Article
Related Article Reference :  Geometrically Mediated Topographic Steering of Neurite Behaviors and Network Formation

Measurements
Soma Surface :  1091.79 μm2
Number of Stems :  1
Number of Bifurcations :  1
Number of Branches :  3
Overall Width :  112.8 μm
Overall Height :  168.51 μm
Overall Depth :  0.17 μm
Average Diameter :  5.71 μm
Total Length :  405.11 μm
Total Surface :  7161.17 μm2
Total Volume :  10695.3 μm3
Max Euclidean Distance :  178.64 μm
Max Path Distance :  290.76 μm
Max Branch Order :  1
Average Contraction :  0.82
Total Fragmentation :  68
Partition Asymmetry :  0
Average Rall's Ratio :  1.73
Average Bifurcation Angle Local :  97.63°
Average Bifurcation Angle Remote :  13.42°
Fractal Dimension :  1.03

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