8.6.82 - Released: 2025-05-21 - Content: 275062 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_100528
Cell Name :  Tracetest_N360_semicircle_Map2tau_81_20
Archive Name :  Kuddannaya
Species Name :  rat
Strain :  Sprague-Dawley
Structural Domains :  Dendrites, Soma, No Axon
Physical Integrity :  Dendrites Moderate
Morphological Attributes :  Diameter, 3D, Angles
Min Age :  1.0 day
Max Age :  1.0 day
Gender :  Not reported
Min Weight :  Not reported
Max Weight :  Not reported
Development :  neonatal
Primary Brain Region :  neocortex
Secondary Brain Region :  frontal
Tertiary Brain Region :  Not reported
Primary Cell Class :  principal cell
Secondary Cell Class :  Not reported
Tertiary Cell Class :  Not reported
Original Format :  Neurolucida.dat
Experiment Protocol :  in vitro
Experimental Condition :  semicircular micro-pattern plating
Staining Method :  immunostaining
Slicing Direction :  Not applicable
Slice Thickness :  Not applicable
Tissue Shrinkage :  Not reported
Objective Type :  water
Magnification :  10x
Reconstruction Method :  Neurolucida
Date of Deposition :  2018-06-21
Date of Upload :  2018-11-27
Persistence Vector :  Tracetest_N360_semicircle_Map2tau_81_20.pvec
Note :  Plated on polydimethylsiloxane supports and incubated with neuron-specific microtubule associated protein-2 antibody.

Reference Article
Related Article Reference :  Geometrically Mediated Topographic Steering of Neurite Behaviors and Network Formation

Measurements
Soma Surface :  4349.26 μm2
Number of Stems :  5
Number of Bifurcations :  5
Number of Branches :  15
Overall Width :  106.32 μm
Overall Height :  192.77 μm
Overall Depth :  19.16 μm
Average Diameter :  2.98 μm
Total Length :  647.21 μm
Total Surface :  5468.34 μm2
Total Volume :  4545.6 μm3
Max Euclidean Distance :  140.59 μm
Max Path Distance :  155.14 μm
Max Branch Order :  3
Average Contraction :  0.91
Total Fragmentation :  119
Partition Asymmetry :  0.6
Average Rall's Ratio :  1.82
Average Bifurcation Angle Local :  92.79°
Average Bifurcation Angle Remote :  96.59°
Fractal Dimension :  1.02

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