8.6.82 - Released: 2025-05-21 - Content: 275062 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_100420
Cell Name :  Tracetest_N360_semicircle_Map2Tau_74_semi-auto_15
Archive Name :  Kuddannaya
Species Name :  rat
Strain :  Sprague-Dawley
Structural Domains :  Dendrites, Soma, No Axon
Physical Integrity :  Dendrites Moderate
Morphological Attributes :  Diameter, 2D, Angles
Min Age :  1.0 day
Max Age :  1.0 day
Gender :  Not reported
Min Weight :  Not reported
Max Weight :  Not reported
Development :  neonatal
Primary Brain Region :  neocortex
Secondary Brain Region :  frontal
Tertiary Brain Region :  Not reported
Primary Cell Class :  principal cell
Secondary Cell Class :  Not reported
Tertiary Cell Class :  Not reported
Original Format :  Neurolucida.dat
Experiment Protocol :  in vitro
Experimental Condition :  semicircular micro-pattern plating
Staining Method :  immunostaining
Slicing Direction :  Not applicable
Slice Thickness :  Not applicable
Tissue Shrinkage :  Not reported
Objective Type :  water
Magnification :  10x
Reconstruction Method :  Neurolucida
Date of Deposition :  2018-06-21
Date of Upload :  2018-11-27
Persistence Vector :  Tracetest_N360_semicircle_Map2Tau_74_semi-auto_15.pvec
Note :  Plated on polydimethylsiloxane supports and incubated with neuron-specific microtubule associated protein-2 antibody.

Reference Article
Related Article Reference :  Geometrically Mediated Topographic Steering of Neurite Behaviors and Network Formation

Measurements
Soma Surface :  6548.81 μm2
Number of Stems :  5
Number of Bifurcations :  3
Number of Branches :  11
Overall Width :  59.96 μm
Overall Height :  150.18 μm
Overall Depth :  2.81 μm
Average Diameter :  2.86 μm
Total Length :  358.15 μm
Total Surface :  3698.17 μm2
Total Volume :  3400.93 μm3
Max Euclidean Distance :  139.96 μm
Max Path Distance :  145.12 μm
Max Branch Order :  3
Average Contraction :  0.82
Total Fragmentation :  71
Partition Asymmetry :  0.67
Average Rall's Ratio :  2.01
Average Bifurcation Angle Local :  92.75°
Average Bifurcation Angle Remote :  154.35°
Fractal Dimension :  1.02

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