8.6.82 - Released: 2025-05-21 - Content: 275062 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_100288
Cell Name :  Tracetest_N360_semicircle_Map2Tau2_120_semi-auto_11
Archive Name :  Kuddannaya
Species Name :  rat
Strain :  Sprague-Dawley
Structural Domains :  Dendrites, Soma, No Axon
Physical Integrity :  Dendrites Moderate
Morphological Attributes :  Diameter, 3D, Angles
Min Age :  1.0 day
Max Age :  1.0 day
Gender :  Not reported
Min Weight :  Not reported
Max Weight :  Not reported
Development :  neonatal
Primary Brain Region :  neocortex
Secondary Brain Region :  frontal
Tertiary Brain Region :  Not reported
Primary Cell Class :  principal cell
Secondary Cell Class :  Not reported
Tertiary Cell Class :  Not reported
Original Format :  Neurolucida.dat
Experiment Protocol :  in vitro
Experimental Condition :  semicircular micro-pattern plating
Staining Method :  immunostaining
Slicing Direction :  Not applicable
Slice Thickness :  Not applicable
Tissue Shrinkage :  Not reported
Objective Type :  water
Magnification :  10x
Reconstruction Method :  Neurolucida
Date of Deposition :  2018-06-21
Date of Upload :  2018-11-27
Persistence Vector :  Tracetest_N360_semicircle_Map2Tau2_120_semi-auto_11.pvec
Note :  Plated on polydimethylsiloxane supports and incubated with neuron-specific microtubule associated protein-2 antibody.

Reference Article
Related Article Reference :  Geometrically Mediated Topographic Steering of Neurite Behaviors and Network Formation

Measurements
Soma Surface :  961.51 μm2
Number of Stems :  2
Number of Bifurcations :  1
Number of Branches :  4
Overall Width :  27.88 μm
Overall Height :  79.31 μm
Overall Depth :  20.94 μm
Average Diameter :  2.33 μm
Total Length :  115.19 μm
Total Surface :  772.9 μm2
Total Volume :  529.94 μm3
Max Euclidean Distance :  60.34 μm
Max Path Distance :  64.71 μm
Max Branch Order :  1
Average Contraction :  0.98
Total Fragmentation :  19
Partition Asymmetry :  0
Average Rall's Ratio :  1.24
Average Bifurcation Angle Local :  32.15°
Average Bifurcation Angle Remote :  11.18°
Fractal Dimension :  1.01

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