8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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Details about selected cell
NeuroMorpho.Org ID :  NMO_90292
Cell Name :  TRPP3Gal4UAS-ChR2mCherry3dpf_x40W_slide42larva1beyond30rostral
Archive Name :  Djenoune_wyart
Species Name :  zebrafish
Strain :  Tg(pkd2l1:Gal4)icm10
Structural Domains :  No Dendrites, No Soma, Axon
Physical Integrity :  Axon Incomplete
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  Not reported
Max Age :  Not reported
Gender :  Not reported
Min Weight :  Not reported
Max Weight :  Not reported
Development :  larval
Primary Brain Region :  spinal cord
Secondary Brain Region :  ventral
Tertiary Brain Region :  rostral
Primary Cell Class :  sensory
Secondary Cell Class :  GABAergic
Tertiary Cell Class :  cerebrospinal fluid-contacting neurons (CSF-cNs)
Original Format :  Simple Neurite Tracer.traces
Experiment Protocol :  in vivo
Experimental Condition :  Control
Staining Method :  mcherry, immunostaining
Slicing Direction :  whole mount
Slice Thickness :  Not applicable
Tissue Shrinkage :  Not reported
Objective Type :  water
Magnification :  40x
Reconstruction Method :  Simple Neurite Tracer
Date of Deposition :  2017-11-22
Date of Upload :  2018-08-02
Persistence Vector :  TRPP3Gal4UAS-ChR2mCherry3dpf_x40W_slide42larva1beyond30rostral.pvec
Note :  UAS:ChR2mCherry transgenic

Reference Article
Related Article Reference :  State-Dependent Modulation of Locomotion by GABAergic Spinal Sensory Neurons.

Measurements
Soma Surface :  N/A
Number of Stems :  1
Number of Bifurcations :  9
Number of Branches :  19
Overall Width :  2.08 μm
Overall Height :  13.16 μm
Overall Depth :  19.14 μm
Average Diameter :  0.25 μm
Total Length :  80.54 μm
Total Surface :  63.25 μm2
Total Volume :  3.95 μm3
Max Euclidean Distance :  22.31 μm
Max Path Distance :  45.42 μm
Max Branch Order :  5
Average Contraction :  0.7
Total Fragmentation :  218
Partition Asymmetry :  0.47
Average Rall's Ratio :  2
Average Bifurcation Angle Local :  74.63°
Average Bifurcation Angle Remote :  83.2°
Fractal Dimension :  1.25

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